Thiothrix litoralis: J9253_03120
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Entry
J9253_03120 CDS
T07754
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tlo
Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlo03032
]
J9253_03120
03036 Chromosome and associated proteins [BR:
tlo03036
]
J9253_03120
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_03120
DNA replication proteins [BR:
tlo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J9253_03120
Chromosome and associated proteins [BR:
tlo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J9253_03120
DNA repair and recombination proteins [BR:
tlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J9253_03120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QTR46949
LinkDB
All DBs
Position
650974..651279
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AA seq
101 aa
AA seq
DB search
MTKSEIIDILSRKQSHLSSRDVELSVKLLLDKMSESLSNGGRIEVRGFGSFSLHHRAARK
GRNPKTGDQVALPPKHVPHFKPGKELRERVNESRVGFPIQD
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaaatcattgatattctgtcacgcaaacaaagccatttaagcagccgg
gatgtagaactttccgtaaagctattgctcgacaaaatgagtgagtctttgtccaatggc
ggacgtattgaagtccgtggattcggaagcttttccctgcatcatcgtgcagcgcgtaaa
ggccgtaatcccaaaacgggcgatcaggtggcactgccgccgaaacatgtgcctcacttc
aaacccggtaaggaattgcgggagcgcgtgaatgaatcacgggtcggttttccgattcag
gattaa
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