Thiothrix litoralis: J9253_03310
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Entry
J9253_03310 CDS
T07754
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tlo
Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlo03032
]
J9253_03310 (gyrA)
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_03310 (gyrA)
Enzymes [BR:
tlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J9253_03310 (gyrA)
DNA replication proteins [BR:
tlo03032
]
Prokaryotic type
DNA Topoisomerases
J9253_03310 (gyrA)
DNA repair and recombination proteins [BR:
tlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J9253_03310 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QTR46985
LinkDB
All DBs
Position
689572..692181
Genome browser
AA seq
869 aa
AA seq
DB search
MATFAKEIIPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN
KSYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSLRYMLVDGQGNFGSVDGDSPAAM
RYTEVRMSKVAHELQMDIDKETVDFVPNYDGNEKEPSVFPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTETVNACLALLSDPDMDISDLMEYLPGPDFPTAGIINGARGIREAYTTGKGRI
YVRARANVEVDARTGRETIIVTELPYQVNKARLLEKIAELVKEKKIEGISELRDESDKDG
MRMVIELKRGESGDVLINNLYKQTQMQSVFGINMVALLDGQPRLLNLKDILSAFLRHRRE
IVTRRTIFEVRKARERAHILEGLAVALSNIDDIITLIKSAPSPADAKLGLVARAWNAGIV
SDMLSRSGADTCRPDDLPEQYGLRPDGYWLSEVQAQAILDLRLHRLTGLEKDKIIAEYRE
LLEKIADLLEILSNPDRLLQVIRDELLLIRDTYGDARRTEINVVGEDLCMEDLIADEEVM
VTFSHAGYAKAQTLDTYRAQKRGGRGKAATSMKDEDFIEKLFVASMHDTLLCFSSRGRMY
WLKVYQLPMGGRGARGKPMVNLLPLEEGERINAVLPIREYAEDKYIFMATSEGTVKKTSL
ADFSRPRTAGIIAVDLRDGDQLVDVAVTNGDNEVMLFSTSGKAIRFHESDVRAMGRTAAG
VRGIRLEEGQEVNALIILGEGELLIATENGYGKRTRAEEFSQQGRGGQGVIAIQTSDRNG
NAIGAVQVREECQIMLITDGGTLVRTPVVDVSIVGRNTQGVTLIRLSEGEKLVQVAPILT
DVSDEDLDAAELTDMTEANNATNITDDQE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggccacatttgccaaggaaattatcccggttaatctcgaagatgaaatgcgtcagtcc
tatctggactacgcgatgagtgtcatcgtcgggcgtgctttaccagacgtgcgcgacggt
ttgaaacccgtacatcgtcgcgtgttgtttgccatgagtgaacttggcaacgactggaac
aagtcttacaaaaaatctgcgcgtatcgttggtgacgtgatcggtaaataccatccgcac
ggtgatacggctgtgtacgatacgatggtgcggatggcgcaaccgttttcactgcgctac
atgctggtggacgggcagggtaacttcggttccgtggatggtgactcaccagcggcgatg
cgttataccgaagtgcgtatgtccaaggtggctcatgagttgcaaatggacatcgacaaa
gaaaccgtcgatttcgtccccaactacgatggcaacgaaaaagaacccagcgtattcccc
acgcgcattcccaatctgctggttaacggttcttccggtatcgcggtcggtatggcgacc
aatattccgccccacaacctgaccgaaacggtcaatgcttgtctggcattgctctccgac
ccggatatggacatcagcgatttgatggaatacctgccggggccagatttcccgacggcc
ggtatcattaacggcgcacgcggtatccgcgaagcctacacgacagggaaaggccgcatc
tacgtccgcgcccgtgccaatgtcgaagtcgatgcccgcacgggtcgcgaaaccatcatc
gtcaccgagttaccgtatcaggtcaacaaggcacgtttgctggaaaaaatcgccgaactg
gtgaaagagaaaaagatcgaaggcatttccgagttgcgcgacgagtccgacaaggacggg
atgcgcatggtgatcgaactcaagcgcggtgaatccggcgacgttctcatcaataacttg
tacaagcaaacccagatgcagagcgtgttcggcatcaatatggtggcgctgctggacggt
caaccgcgtttactgaacctaaaagacatcctttcggccttcctgcgtcatcgccgcgag
atcgtgacccgccgcaccatttttgaagtccgcaaagcgcgtgaacgtgctcatatcctt
gaaggtttggcggtggcgttgtcgaatatcgacgacatcattacgctgattaaatctgcg
cccagcccagccgatgcgaaactgggtttggtggcgcgtgcttggaatgcaggcattgtt
agcgacatgctcagccgttccggtgcggatacctgtcgcccggacgatttgccagagcaa
tacggtttgcgcccagacggttactggctgtctgaagtacaagcgcaagcgattctggat
ttacgtctgcaccgcctgactgggctggaaaaagacaagatcattgccgaataccgtgaa
ttgctggaaaagattgccgatttgctggaaattcttagtaatcctgaccgcttgctgcaa
gtgatccgtgatgaattgctgctgatccgtgacacttacggtgatgctcgccgcactgaa
atcaacgtggtcggcgaagacctgtgcatggaagacctgattgctgacgaagaagtcatg
gtcacgttctcgcacgccggttacgccaaagcgcaaaccctcgacacttaccgtgcgcaa
aaacgcggcggacgtggcaaagccgccacgtcaatgaaagacgaagacttcatcgaaaag
ctgttcgttgccagtatgcacgacaccttgctgtgcttctccagccgggggcgcatgtat
tggttgaaggtataccagttgccaatgggcggacgcggtgcacgcggcaaaccgatggtc
aacttgctgccattggaagaaggcgaacgcatcaatgcggtgctgccgatccgcgaatac
gccgaagacaaatacatcttcatggcaacgtcagaaggtacggtaaagaaaacctcactg
gctgatttctcgcgcccacgtactgctgggatcattgccgttgacctgcgtgatggtgac
caattggtcgatgtcgccgtaaccaacggtgacaacgaagtcatgctgttcagcacttcc
ggtaaagccatccgtttccacgaatccgacgtgcgggcgatggggcgtactgccgctggc
gtgcgtggtattcgtttggaagaaggtcaggaagtgaatgcgctgattattctgggcgaa
ggtgaattgctgattgccaccgaaaatggctacggcaaacgtactcgcgccgaagaattt
tcgcaacaaggtcgcggtggacagggcgtaatcgccatccagacttccgatcgtaacggc
aatgcgataggcgcagtgcaagttcgtgaggaatgtcaaatcatgctcattaccgacggt
ggtacgctagtacgcacgccggtggtagacgtttccatcgtgggtcgcaatacgcagggc
gtcaccttgattcgcctcagtgagggtgaaaaattggtgcaggttgcgccaatcttgacc
gatgttagcgatgaagaccttgatgctgccgagcttaccgatatgaccgaagctaataat
gctaccaacataactgacgatcaggaataa
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