Thiothrix litoralis: J9253_03565
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Entry
J9253_03565 CDS
T07754
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J9253_03565 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlo03019
]
J9253_03565 (pnp)
03016 Transfer RNA biogenesis [BR:
tlo03016
]
J9253_03565 (pnp)
Enzymes [BR:
tlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J9253_03565 (pnp)
Messenger RNA biogenesis [BR:
tlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J9253_03565 (pnp)
Transfer RNA biogenesis [BR:
tlo03016
]
Prokaryotic type
tRNA degradation factors
J9253_03565 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
Alpha_E1_glycop
Motif
Other DBs
NCBI-ProteinID:
QTR47034
UniProt:
A0ABX7WT58
LinkDB
All DBs
Position
749167..751260
Genome browser
AA seq
697 aa
AA seq
DB search
MAKITKTFQYGNNTVTIETGEIAKQATAAVLITMDDTSVLVTVVGSKETVPGRDFFPMTV
DYQEKFYAAGRIPGGFFKREARATEEETLVARLIDRPLRPLFPEGFTHEVQLIATVVSMN
PAVSADIPALLGASAVMALSGMPFQGPIGAARVGYRDGGYLLNPSKEELLTSDLDLVIAG
TESAVLMVESEAKELSEEVMLGAVMFGHEQMQVAVNAIKELAAEVATPAWDWSAPVANVA
LADAVEAACSADLVEAFQIADKQARYARIHEVQSALVEKLAAKEGAEGFSADEIKGEFKN
AEKKVVRGTILDGKPRIDGRALDAVRQITVRVGVLPRAHGSALFTRGETQALVVTTLGTE
RDAQVIDAITGEYKDNFLFNYNFPPYSVGETGRFGSPKRREIGHGRLAKRGVKAMVPSTD
DFPYTIRCVSEITESNGSSSMASVCGSSLAMMDAGVPLKAPVAGIAMGLIKEGERFAVLS
DILGDEDHLGDMDFKVAGSSDGITALQMDIKITGITKDIMQQALVQAKAGRLHILGEMAK
GLEAPRDEVSEFAPRYVTMKINPDKIREVIGKGGETIRGITAATGASVDINDEGFIKIAA
IDAKAAYEARSMIEAITAEVELDKVYTGKVVRLMDFGAFVTILPGKDGLLHISQISNDRV
EKVTDFVNEGDIVKVKVIEIDRQGRMRLSMKAVGEGE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcaccaagactttccaatacggtaataataccgtcactatcgaaactggc
gaaatcgccaagcaagctaccgccgccgtcctgatcaccatggacgacaccagtgttctg
gttaccgtcgttggcagcaaagaaaccgttccgggtcgtgatttcttccccatgacggtg
gattatcaagaaaaattctacgcagcaggccgcattcccggtggtttcttcaaacgcgaa
gcgcgtgctactgaagaggaaacattggttgcccgtctgatcgaccgtcctttgcgccca
ctgttcccagaaggcttcacgcatgaagtgcaattgattgcgacggtggtttccatgaac
ccggcagtcagcgctgatattccagcattgctgggtgcttctgcggtgatggcgctgtct
ggtatgccattccaaggccctatcggtgcagcacgggttggctaccgcgatggtggttat
ttgctgaatccatccaaagaagagctgctcacgtctgatttggatctggtgattgcaggt
actgaatctgcggtgctgatggttgaatctgaagcgaaagagctgagcgaagaggtgatg
ctgggcgcggtcatgttcggtcacgagcaaatgcaagttgcggtcaatgccatcaaagaa
ctggcggcagaagtcgccactccggcgtgggactggtctgctcctgtagcgaatgttgca
ctggcagatgcggtggaagcggcttgttctgctgatctggttgaagctttccagattgct
gataagcaagcgcgttatgcccgtattcatgaagtgcagagtgcactggttgaaaagctg
gcagcgaaagaaggcgcagaaggtttcagcgctgacgaaatcaaaggtgaattcaaaaac
gctgagaagaaagtcgtgcgcggtactatccttgatggtaagccccgtattgatggccgt
gcccttgacgcagtacgtcaaattactgttcgcgttggcgtattgccacgtgcacacggt
tccgcactgttcacccgtggtgaaacacaggcactggttgtcaccacgctgggtacagaa
cgtgatgcacaggtcattgacgcgattacgggtgaatacaaagataacttcctgttcaac
tacaacttcccgccgtacagcgtaggcgaaaccgggcgttttggttcaccgaagcgtcgt
gaaatcggtcatggtcgtttggctaaacgtggtgtgaaggcgatggtgccaagcactgac
gatttcccttacaccatccgttgcgtgtctgaaatcactgaatccaatggttccagctcc
atggcgagtgtgtgcggcagttcattggcaatgatggatgcaggcgtaccgttgaaagca
ccggttgcgggtatcgcgatgggtctgatcaaggaaggcgagcgctttgctgttctgtcc
gacatccttggtgatgaagatcacctcggtgatatggactttaaagtagccggttcttcc
gacggtattaccgcgctgcaaatggacatcaagatcacgggcatcaccaaggacatcatg
cagcaagccctggtacaagccaaagcaggtcgtttgcatatcctcggcgaaatggccaaa
ggtctggaagcgccacgtgacgaagtgtctgaattcgcaccccgttacgtcaccatgaag
atcaacccggacaaaatccgcgaagttatcggtaaaggtggcgaaaccatccgtggcatt
actgctgcaacgggcgcaagtgttgacatcaatgacgaaggtttcatcaaaatcgccgcc
attgacgcgaaagctgcctatgaagcgcgtagcatgatcgaagcgatcactgctgaagtc
gagctggacaaagtttacaccggtaaagtggtacgtttgatggacttcggtgcattcgtg
accatcctgccgggtaaagacggtttgttgcacatttcccagatcagcaatgaccgtgtg
gaaaaagttacggatttcgtgaatgaaggcgatatcgtcaaagttaaagtcatcgaaatc
gaccgtcagggtcggatgcgtttgagcatgaaagcagtaggcgaaggcgagtaa
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