Thiothrix litoralis: J9253_05325
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Entry
J9253_05325 CDS
T07754
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J9253_05325 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tlo01007
]
J9253_05325 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlo03016
]
J9253_05325 (aspS)
03029 Mitochondrial biogenesis [BR:
tlo03029
]
J9253_05325 (aspS)
Enzymes [BR:
tlo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
J9253_05325 (aspS)
Amino acid related enzymes [BR:
tlo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
J9253_05325 (aspS)
Transfer RNA biogenesis [BR:
tlo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J9253_05325 (aspS)
Prokaryotic type
Other AARSs
J9253_05325 (aspS)
Mitochondrial biogenesis [BR:
tlo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
J9253_05325 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QTR47359
UniProt:
A0ABX7WUH0
LinkDB
All DBs
Position
complement(1117878..1119647)
Genome browser
AA seq
589 aa
AA seq
DB search
MRSHYCGQVDEALLDQQVTLCGWVNRRRDHGGVIFIDLRDREGLVQVVFDPDRVDVFNTA
EKSRNEYVLQVVGKVRRRPAGTENANLRSGQIEILGLELNVLNASETPPFQLDEDNVNEE
TRLTYRYIDLRRPEMQKRMQMRAKVTGFLRRFLEDNGFLDIETPMLTKATPEGARDYLVP
SRTHPGSFFALPQSPQLFKQLLMMSGMDRYYQFARCFRDEDLRADRQPEFTQLDIETSFM
DDNAIMGMMEDMMRATFKETLGVELPNPLPRMPYSEAMHRFGSDKPDMRIPLEFIEISDL
MENVEFKVFSAPAKDPDSRVVAMRLPKGAELSRKEIDDYTNFVGRYGAKGLAYIKVNDAA
TGRDGLQSPILKFLPDETVSGIMERTGAQTGDLIFFGADKSRVVNDALGALRVKLGHDRG
LVEGEWAALWVVDFPMFEWDDKDNRWVALHHPFTAPKGTPEELLANPSQALSIAYDMVLN
GTEVGGGSVRIHSMEMQKSVFKLLGISDEEANEKFGFLLNALKYGCPPHGGLAFGLDRLI
MLMTGSQSIRDVMAFPKTQTAACPLTDAPAEVNLKQLRELNIRVQLPQK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagccattattgtgggcaggtggatgaagccctgctggatcagcaagttactttg
tgtgggtgggtaaaccgtcgtcgggatcacggcggggttatttttattgatttgcgcgac
cgcgaagggctggtacaggttgtatttgaccctgaccgtgtggatgtttttaacactgct
gaaaagtcgcgtaatgagtacgtattacaagtggtgggtaaggtacgtcgtcgccctgct
ggcacagaaaatgccaacctgcgtagtggccaaattgaaattctcggtcttgaattaaac
gttttaaatgcgtctgaaaccccacccttccaattggacgaagacaacgttaacgaagaa
acccgcctgacgtatcgctacattgacttgcgccgccctgaaatgcaaaaacggatgcag
atgcgagccaaagtcactggctttttgcgccgtttcctggaagacaatggtttcctcgac
atcgaaaccccgatgctgaccaaggcaacaccagaaggtgcacgcgattatctcgtgcct
agccgtactcatccggggtcattcttcgccctgccccagtcaccacagttgttcaagcaa
ttgctgatgatgtccggcatggatcgttactaccagtttgcacgttgcttccgtgacgaa
gacctacgggctgaccgccagcctgaattcacccagttggatattgaaacttcctttatg
gatgacaatgccatcatgggaatgatggaagacatgatgcgggctactttcaaggaaacc
cttggggtagaattgcctaacccgctgccacggatgccctattccgaagccatgcaccgt
tttggttctgacaagcctgacatgcgcattccgctggagtttatcgaaatcagcgacctg
atggaaaacgttgaattcaaggtattctctgcaccagccaaagaccctgacagccgcgtc
gttgccatgcgccttcctaaaggtgctgagttatcacgtaaagaaatcgacgactacact
aactttgtcgggcgttatggtgcaaaaggcttggcttatatcaaggtcaatgatgctgct
actgggcgtgatggtctgcaatcccctatcctgaaattcctgccggatgaaactgtcagt
ggtattatggaacgtaccggagcacaaaccggcgacctaattttctttggggctgacaaa
tcccgcgtggttaacgatgcactgggtgcattacgggtcaagttgggtcatgaccggggc
ttggtcgaaggtgaatgggcagccttatgggttgttgatttcccaatgtttgaatgggat
gacaaagataaccgttgggttgcactgcatcaccccttcactgcacctaaaggcacaccg
gaagaattgctggctaaccccagtcaagcgctttccatcgcgtatgacatggtattgaac
ggtaccgaagtcggtggtggttcagtacgtattcatagcatggaaatgcagaagtctgta
ttcaaattactgggtatttctgatgaagaagccaatgagaaattcggcttcttgttgaat
gccttgaaatacggctgccctcctcacggtggcttggcctttggtctggatcgcttgatc
atgttgatgactggctcccaatctatccgtgatgtgatggcattcccgaaaacccaaaca
gccgcttgcccattaaccgatgcacccgcagaagttaatctcaagcaattacgtgagttg
aatatccgggtacagttaccacagaagtaa
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