Thiothrix litoralis: J9253_06210
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Entry
J9253_06210 CDS
T07754
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tlo
Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlo03021
]
J9253_06210 (rpoS)
Transcription machinery [BR:
tlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J9253_06210 (rpoS)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QTR48346
LinkDB
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Position
complement(1300130..1301122)
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AA seq
330 aa
AA seq
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MPLVSDEVSDVDTLDAAELEDDLEDDSSDDLSDTDEDVAIVKVTTGAAAFSGDIDATQMY
LREIEFSPLLTPEEEVLYGRLARQGDEFGRKKMITCNLRLVVKIARRYMGRGLPLPDLIE
EGNLGLIHAVEKFDPERGFRFSTYATWWIRQNIERALMNQTRTIRLPIHVNKELNAYMRK
MREMTQKLGYEPSLPEVAEALDKPVEVLRKLLDFNERITSLDVTVGKDSDSPLVDFVSAE
TSDEPDSKLEDEDITQSVDNWLGQLEFKQKEVIVRRFGLHGHERATLEQVGEALGLTRER
VRQIQMDALKRLRRILENKGLSGENLLGIH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcccttagtatcagatgaggtgtcggatgttgatacattggatgctgctgagctggaa
gatgatcttgaggatgacagtagcgatgacctgtctgatacagatgaagacgtagccatc
gtcaaagttactacgggagcagcggctttttcgggcgacattgatgccacgcaaatgtac
ctgcgggaaatcgaattttctccgttgttaacccccgaagaagaagttttgtatggtcgt
cttgcccgtcagggtgatgaattcggccggaagaaaatgattacctgcaatttgcggctg
gtggtaaaaattgcccgccgctatatgggacgtggtttgcctttgcctgatttgattgaa
gagggtaatctggggttgattcatgccgtagaaaaatttgacccggagcgcggcttccgt
ttttcaacgtatgcgacttggtggattcgtcaaaatattgaacgtgccttgatgaaccag
acccgcaccatccgtctgcccattcacgtcaataaagaattgaatgcgtacatgcgcaag
atgcgggaaatgacccaaaagctgggttatgagccttcactgcctgaagtggcggaagca
ctcgataaaccggttgaagtattgcgtaagctgctggatttcaacgaacggattacctcg
ctggatgtgacggtgggaaaagatagtgatagcccgctggtcgattttgtcagcgcggaa
accagcgatgagcctgacagtaagctggaagatgaagacattacccaatccgtggacaac
tggttaggtcagcttgaattcaagcaaaaagaagtgattgtgcgtcgtttcgggttgcat
ggtcatgaacgcgccacactggaacaggtgggtgaagcattgggtttgacccgcgaacgg
gtacgccagattcagatggatgcactcaagcgcttgcgccggattctcgaaaacaagggt
ctgtccggcgagaacctgttaggtattcactaa
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