Thiothrix litoralis: J9253_06305
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Entry
J9253_06305 CDS
T07754
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tlo
Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_06305
Enzymes [BR:
tlo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J9253_06305
DNA repair and recombination proteins [BR:
tlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J9253_06305
Prokaryotic type
J9253_06305
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QTR47542
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All DBs
Position
1316822..1318180
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AA seq
452 aa
AA seq
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MTTAIVWLRQDLRLADNPALYHACRTCDHIIPLFIDDPLPTSVSQLGAASRAWLHHSLQD
LDTRLQAIGNRLTLQQGAALPILQKLIATTGATHVYWNRVYDPQSLARDKHLKEALKPSC
AVHSFNASLLNEPWEVLKADSTPYKVFTPFWKAMLKHGIQHLPLPLPERIPALPLQPESL
PLETLGLLPHIRWDTGMMAHWQVGEEAAMQKLHDFLPTHGGAYKEARNFPAQPGTARLSP
HLHFGEISPRQAVYHTERHLAEQPGAENGLRHFMQEIGWREFAYYLLYHFPHTVERALDA
RFDHFPWADDYTDVLERWQRGQTGFPIIDAGMRELWQTGWMHNRVRMIVASLLTKNLLVP
WQVGEQWFRDTLVDADLASNVLGWQWVAGCGADAAPYFRIFNPTLQGQTFDPDGEYIRRW
IPELQTRDYPSPIMDLKASRERALAKFSQIKQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgccatcgtttggctgcggcaagacctgcgccttgctgataacccagccttg
taccatgcctgccgtacctgcgaccacattatcccgctcttcattgacgacccgttgccc
acttctgtcagccaattgggcgccgccagtcgcgcatggttacaccacagtttgcaagac
ctggatacacgcttgcaagccataggaaaccgcctgaccttacaacaaggcgcagcactg
ccgatcttgcaaaaactgatcgccaccaccggcgcaacccatgtgtattggaaccgggta
tacgacccgcaaagcctcgcccgcgacaagcacctcaaggaagctctcaagccaagctgt
gctgtccacagcttcaacgccagcctgctcaatgaaccgtgggaagtgctcaaagccgat
agcacaccctacaaagtcttcacccctttctggaaagccatgttgaaacacggcatccag
catttgcccctacccctgccggaacgcattcccgccctccccttgcaaccagaaagcctg
ccactggaaacactgggtttgctgccgcatatccgttgggacaccggcatgatggcgcac
tggcaagtcggtgaagaagctgccatgcaaaagttgcacgatttcttgccaacacatggc
ggtgcttacaaggaggcgcgtaatttccccgctcaacccggcactgcccggctttccccc
catctgcatttcggtgaaatcagcccccgccaagcggtttaccataccgagcggcatttg
gcagaacagcccggcgcggaaaatggtttacgccattttatgcaggaaattggctggcgg
gaatttgcgtattacctgctgtaccactttccgcacaccgtcgaacgggcgctggatgcg
cgtttcgaccactttccgtgggcagacgattacaccgacgtattggaacgctggcaacgt
gggcaaaccggctttcccatcattgatgcggggatgcgcgaactctggcaaaccggttgg
atgcacaatcgggtacgcatgatcgtggcatcattgctcaccaaaaacttgctggtgccg
tggcaggtgggggaacagtggttccgggatacgctggtggatgctgatcttgccagcaat
gtactcgggtggcagtgggtagccggttgcggggcggatgccgcaccgtatttccgcatt
ttcaacccgaccctgcaagggcagacgtttgatcctgacggtgaatacatccggcggtgg
ataccagaattacagacacgggattatccctcgccgatcatggacttaaaggctagccgc
gaacgggcattggcgaaattttcacaaatcaaacaatag
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