KEGG   Thiothrix litoralis: J9253_07635
Entry
J9253_07635       CDS       T07754                                 
Name
(GenBank) transcriptional regulator
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
tlo  Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:tlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tlo03000]
    J9253_07635
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlo02048]
    J9253_07635
Transcription factors [BR:tlo03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    J9253_07635
Prokaryotic defense system [BR:tlo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    J9253_07635
SSDB
Motif
Pfam: HTH_3 CCDC113_CCDC96_CC HTH_19 CHASE3 Sulf_coat_C FAA_hydro_N_2 DUF7776
Other DBs
NCBI-ProteinID: QTR47779
LinkDB
Position
1565330..1565788
AA seq 152 aa
MDFAAVKTKAKELFAQASFISEIKHEADYENALALMEELLEDYDEHRTLIGILANAIEEW
ENVAPEFAEFNQRVAQLDDGVAVLRTLIDQYQLKAEDLKNEIGSKSLVSMILNGSRNMTR
EHIQALSLRFNLNPAIFFHTTGLRLVSTSRKT
NT seq 459 nt   +upstreamnt  +downstreamnt
atggactttgcggctgtgaaaaccaaggcgaaagagctgttcgcacaagccagcttcatt
agtgagatcaagcatgaggctgactatgaaaatgcactggcattgatggaagagttgctg
gaggattatgacgaacaccgtaccctgatcggcattctcgctaatgcgattgaggaatgg
gagaatgttgcgcctgagtttgccgaatttaaccaacgggtggcgcaactggatgatggg
gtggcagtgctaagaacgttaatagatcaataccaactgaaagccgaagaccttaaaaat
gaaattggtagcaagagtttggtttccatgatcttgaatggctcacgcaacatgacccgt
gaacatatccaagccttgtccttgcggttcaatttgaatcctgcgatttttttccataca
acgggattgcggttggtctcaacgtcaaggaaaacatag

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