Thiothrix litoralis: J9253_08705
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Entry
J9253_08705 CDS
T07754
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J9253_08705 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlo03019
]
J9253_08705 (pcnB)
Enzymes [BR:
tlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J9253_08705 (pcnB)
Messenger RNA biogenesis [BR:
tlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J9253_08705 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QTR47978
LinkDB
All DBs
Position
complement(1803427..1804758)
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AA seq
443 aa
AA seq
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MLSHEDAAAHVPSAVHHIPPDKVCGRAKDVIRRLQKAGYEAYLVGGCVRDLLLGITPKDF
DIATSARPEEIRRLFNSCRLIGRRFRLAHIYYGRDYLEVATFRAPHDDSDAGGKVNDEGR
ITHDNVYGTLDEDVWRRDFTINALFYNPISGELLDFVGGLEDLRHGQIRLIGDPEMRFRE
DPVRLLRAIRFAAKLGFAIEEDTREPMTSLAILLEGVSSARLFDEIIKLLHSGDGLNTFR
LLREYDMLQHLLPLTAESIEEDSSGNFERMVELSLGNTDQRLREGKSVMPGFLYAVLLWH
KVNLAALALQTEGAPELQALNEAATDALRDQVDFTAVPRRFSNITREIWALQARFRYRDL
RRASALVGNVRFRAAYDFLCLRAEAGEPVKEDAEWWTTFQFATQEEREVLCRDSADKKGG
LRRRKKRKKSTGSSKAAPPPSAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtcacgaggatgctgctgcgcacgtaccttccgccgtgcatcatatacccccc
gataaagtctgtggtcgtgctaaagatgtgatccggcgcttgcaaaaggcgggctacgaa
gcctatctggtgggtggttgtgtgcgcgatttgctgttggggattaccccgaaagacttt
gatattgctaccagcgcccgcccggaagaaatccgccgcttgtttaattcctgccgtttg
atcgggcgacgtttccgcttggcgcatatttattacgggcgtgattatctggaagtcgct
acgttccgtgccccacatgatgacagcgatgcgggcggcaaggtcaatgacgaaggccgc
attacccacgataacgtttacggcacactcgatgaagatgtgtggcggcgtgatttcacc
atcaatgcgttgttttacaacccgatcagtggcgagttgctggattttgtgggtggtttg
gaagatttgcgccacggtcaaatccgtctgattggcgacccggaaatgcgtttccgcgaa
gacccggtgcgcttgctccgcgctatccgctttgctgctaaattagggtttgcgatcgag
gaagacacccgtgaaccaatgacttcactggcaattttgctggaaggggtgtcgtcggcg
cgtttgttcgacgaaatcatcaagttattgcacagcggcgatggcctgaatacgttccgt
ctgctgcgtgaatacgatatgttgcaacacttgctgccgttgacggccgagagcattgag
gaagacagcagcggtaatttcgagcgcatggtggaattgtcgttaggcaataccgatcag
cgtttgcgtgaaggcaaatcagtcatgccggggttcttgtacgccgtgctgttgtggcac
aaggtgaacttggcggcactggccttacagaccgagggagcgccggaactacaggcgctg
aatgaagcggctaccgatgctttgcgtgatcaagtcgatttcactgctgtaccgcgccgt
tttagcaatattacccgcgaaatctgggcgttgcaggcgcgtttccgctaccgtgattta
cgtcgtgcttcggcgttggtggggaatgtgcgtttccgggcggcttatgacttcctgtgc
ctgcgtgccgaggctggcgagccagtgaaggaagacgctgaatggtggacgaccttccag
tttgccacgcaggaagagcgtgaagtgctgtgtcgggattccgccgataaaaaaggtggc
ctgcgccgccgtaaaaagcgcaagaaaagcacaggcagtagcaaagctgcgccaccaccg
tctgcggaatga
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