Thiothrix litoralis: J9253_13230
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Entry
J9253_13230 CDS
T07754
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo00550
Peptidoglycan biosynthesis
tlo01100
Metabolic pathways
tlo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J9253_13230 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9253_13230 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlo01011
]
J9253_13230 (mrdA)
Enzymes [BR:
tlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J9253_13230 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J9253_13230 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QTR44971
LinkDB
All DBs
Position
complement(2733497..2735512)
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AA seq
671 aa
AA seq
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MSDRPIKLERDEQHMFNVRAIVAGVIILFALLAILGRVYQLQVSQHEKYSELSRQHYQKR
IPIPPNRGQIYDRNGVLLADSHTQYVLEVVRDNVGDENGDGRSTLADVDGLIARLGLVIP
LVEKDVRLFKTQARRFKYQSIPIRENLTEEEIAVFAVNRPRFPGVRMEVRMERYYPLLNT
ASHVIGYVGRIDTRDLERVDKDEYTGTTHIGKSGVEASHEDRLHGKAGFELIEVDAHGKK
QNEIGKQEQVGGQELFLGIDINLQILAEKLLEGERGAIVAIDPSNGEVLTLASLPTFDPN
LFIDGISQKDYSSLRDDPGRPLFNRALQAAYPPGSTIKPMVGVAGLAERVVTPGSRVYDP
GFFRLSGQKHVFRCWNKRGHGSVDLKYAIQQSCDTYFYDLAYRMGIDRFSSYMSRFGFGA
KTEIDLPSESSGLMPTREWKEKRHKRSWFPGDTVNIGIGQGYWLSTPLQLAHATSIIANH
GIRLKPHVLRGVRTARNQEEKVLKPEPFPPIETDARFWNLAIQGMENVMRPGGTARAAGA
GAAYRIAGKTGTAQVFGLAGGKYNAGRIAKRLRDHALFVGFAPVENPKIAVAVIIENSSG
SGGHTAAPVGRKIMDAYLLQQYGDHVLKPAGVVVQPKQEVSPETEKADAKEKAAVKTKTK
TKLKKAGGTHD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagaccaattaaactggagcgcgatgagcagcacatgttcaatgtgcgtgct
attgtggcgggcgttattatcctgtttgccttgttagcgatcctggggcgggtttaccag
ctccaggtttcgcagcacgaaaaatattcggaactttcccgccagcattaccagaaacgt
attcccattccgccgaatcgcggtcagatttatgaccgtaacggtgttctgttggcggat
agccacacccaatatgttctcgaagtggtgcgcgataatgttggtgatgaaaatggggat
gggcgctcaacgctggcggatgtcgatggccttattgctaggcttggtttggtcattccg
ttggtggagaaggatgtacgcctgttcaaaactcaggcgcgtcgtttcaaataccagtct
atcccgatccgggaaaatctgaccgaagaagaaattgcggtatttgctgtcaatcgcccg
cgctttccgggggtcaggatggaagtgcgcatggagcgttattatcctttgctcaatacg
gctagccatgtcattggttatgtcgggcgtattgatacccgcgatctggagcgggtagat
aaggatgagtacacaggtacaacccatattggcaaatcgggtgtggaggcgtcccacgaa
gaccgtttgcacgggaaggccggttttgagctgattgaggtggatgcacatggcaaaaag
cagaatgaaattggcaaacaggagcaggtaggcgggcaggagctattccttggcatagac
attaacctgcaaatcttggcggaaaaattactggaaggcgagcggggtgccattgtggcg
atagaccccagcaacggtgaggtattgacgttggccagtttgcctacctttgatcccaat
ttgttcatcgacgggatctcgcaaaaagattactccagcttgcgcgatgaccccggtcgc
cccttgtttaaccgtgctttgcaggctgcgtatccccccggttccaccattaagccgatg
gtaggggtggctggtctggcggaaagggtggtgacaccgggttcacgggtttatgacccc
ggctttttccgcttgtcggggcaaaagcatgtgttccgctgctggaacaaacgtggtcac
ggttcagttgaccttaaatatgcgattcaacaatcctgcgatacctatttttatgacttg
gcttatcgcatgggtattgatcgcttttcgagctacatgagtcgctttggctttggggca
aagacggagattgacctgccttcagagtcgtctggcttgatgccgactagggaatggaaa
gagaaacgtcacaagcgtagctggtttcctggcgacacggtcaatatcggtatcggtcag
gggtactggctgtcaaccccgctgcaactggctcatgcgacttcaattattgctaatcac
ggtatacgtttgaaaccgcatgtcttacgcggggtgcgtactgcgcgtaatcaggaagaa
aaagtactcaagcctgagccttttccgcccattgagacggatgcgcgtttctggaattta
gcgatacaggggatggaaaacgtgatgcgccccggtggtacggcacgggcggcgggtgct
ggggcagcctaccggattgcaggtaaaacaggtacggcgcaagtctttggattagctggc
ggtaaatacaatgccggacgtattgccaagcgcttgcgtgaccatgccctgtttgtgggg
tttgcgcctgtggaaaaccccaaaattgcggtggcggtcattattgaaaactcttcagga
agtggtgggcataccgcagcccccgtcggtcgtaagatcatggatgcttatttgttgcaa
cagtacggggatcatgtcttgaaaccagcaggggtcgtggtgcaacctaaacaggaagtg
tcgccagaaaccgagaaggctgacgcgaaagaaaaagccgctgtgaaaaccaaaactaaa
acaaagctcaaaaaagccgggggtacacatgattaa
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