Thiothrix litoralis: J9253_14090
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Entry
J9253_14090 CDS
T07754
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J9253_14090 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_14090 (ruvB)
Enzymes [BR:
tlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J9253_14090 (ruvB)
DNA repair and recombination proteins [BR:
tlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J9253_14090 (ruvB)
RecFOR pathway proteins
J9253_14090 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
nSTAND3
Mg_chelatase
TIP49
Rad17
AAA_14
AAA_3
AAA_18
AAA_2
RNA_helicase
DUF815
Bac_DnaA
NTPase_1
ABC_tran
AAA_28
AAA_33
NB-ARC
AAA_24
AAA_17
NPHP3_N
Sigma54_activ_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
QTR45127
LinkDB
All DBs
Position
2921070..2922137
Genome browser
AA seq
355 aa
AA seq
DB search
MEKQASHLLSPHLRREEAYADEHIRPRRLQDYIGQPVVREQMEIFIHAARHRGDALDHVL
IFGPPGLGKTTLSHIIAHEMGANLRQTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLS
PVVEEILYPALEDFQLDIMIGDGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIVQ
RLEFYNVDDLAYIVQRASTIIGASIDTEGAQEIARRSRGTPRIANRLLRRVRDYVQVKGN
GLIDRDMADKALNMLNVDHQGFDHMDRRLLLAVMEKFDGGPVGVDSLAAAIGEERGTIED
VLEPFLIQQGFLMRTPRGRVATRRAWQHFGLNIPAHLNLAGNNTDQEGTSLDLFE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaagcatctcacctcctgtcaccgcacctgcgtcgcgaagaagcttatgcg
gatgagcacatacgcccacgccgcctgcaagattacatcggtcaaccggtcgtgcgtgag
cagatggaaatttttattcatgctgcccgccaccggggggatgcactcgatcacgtcctg
atctttggaccacccggcctaggtaaaacaacgctatcacatataatagcgcatgaaatg
ggcgctaacctgcgtcaaacctcagggccagtactggaaaaagctggggatctcgccgcc
ctgctgaccaaccttgaaccacatgatgtactctttatagacgaaatccaccgtctcagc
cctgtagtagaagaaatcctctaccccgccctggaagatttccagctcgacatcatgatc
ggtgatggcccggcagcacgctccatcaagctcgacctccctcccttcaccctcgtcggg
gcaactactcgtgctggcttgctgacctcaccactgcgcgaccgcttcggcattgtgcag
cgtctggaattttacaacgtcgacgaccttgcctacatcgtacaacgcgcctcaaccatt
atcggggcaagcattgacacagagggcgcacaggaaatcgcccggcgctcacgcggcaca
ccacgcattgccaaccgcttgctgcggcgagtgcgtgattacgtgcaagtaaaaggtaac
ggcctgattgaccgcgacatggctgacaaagccctcaatatgctcaacgtcgaccaccaa
ggcttcgaccacatggacagacgcctgctattagctgtcatggaaaaatttgacggcggc
ccagtgggggtagacagtctcgccgctgccatcggtgaagaacgcggcaccattgaagat
gtgctggaacccttcctgattcagcaaggtttcctgatgcgcaccccacgcggcagggtg
gccacccgccgcgcttggcaacacttcgggctgaatattccggcacaccttaaccttgca
ggtaacaacactgatcaggagggcacaagccttgacctgtttgaatga
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