Thiothrix litoralis: J9253_14980
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Entry
J9253_14980 CDS
T07754
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo03030
DNA replication
tlo03430
Mismatch repair
tlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J9253_14980
03430 Mismatch repair
J9253_14980
03440 Homologous recombination
J9253_14980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlo03032
]
J9253_14980
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_14980
Enzymes [BR:
tlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J9253_14980
DNA replication proteins [BR:
tlo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J9253_14980
DNA repair and recombination proteins [BR:
tlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J9253_14980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
HATPase_c
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QTR45300
UniProt:
A0ABX7WWI7
LinkDB
All DBs
Position
3084382..3086562
Genome browser
AA seq
726 aa
AA seq
DB search
MRRVDWRVVMGVAGIGAICLVWLLATGGLIWSTLDEAGRTILKDTLGERIMLLLLMWAVS
LLAVGAALRWMVSYFMTAPARLAEQAQVLLGTNVKRQLEPTGSAENRRLTDLFNQLVQQR
EALREEMDVRVAEAARNTEQEKNRLAALMSELTKSVVVCNLDGRILLYNNRARMQFRKLS
QAPGVAGGGELIGLGRSVYGVFDRKLVAHALENIQHRLQRGAAAPSAQFITTTPSGQLLR
AQMAPVRAVQEADTAAPATMTGFVLMLDNITREFEAQARQDHILHTLTERSRAALGNMQA
ALDVLEYPDVEPEMRERLLTVLREETGGLGNRLRELKSSALDSTVLRWPLEDMLGADLVA
AAIRRIEALGGLTAVEAGVDDSLWLKVESFSLLQALSYLAERLRQECVISTVQLRLSMGT
GRAQLDLCWTPSAAKLTDKVVPGWEHDPMRSGGEDTSLTIQDVVERHGGAFWFEREPETG
TTFFRFLLPLAAPQEQLDSASLVQNESRPEYYDFDLFQPSAQSRSLEDSRLSELSFTVFD
TETTGLDPANGDEIIQIAAVRIVNGKLLRNENFDQLVDPKRNIPAITIPIHGITPEMVHG
QPTIDKVLPAFHQFAQDTVLVAHNAAFDMRCLQVKEKVTGLVFDHPVMDTLLLSAVVHPN
QESHRLEAITERFNINILGRHTALGDAMATAEVFMHLIPLLEEMGIYTLGQAREAAQKTY
YARLKY
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgtggattggcgggtggtgatgggtgtcgccggtattggggcgatttgtctg
gtgtggttgctggcaaccggcggcttgatctggtcaacgctggatgaggcggggcgcacc
atcctcaaagacacgctgggtgaacgcatcatgctgttgctgctgatgtgggcagtgtcg
ctgctggcagtgggtgcagccttgcgctggatggtgtcgtatttcatgacagccccggca
cgcttggcagaacaggcgcaagtgttgctgggtacaaacgttaagcgccagttggaaccg
accggcagtgccgaaaaccgccgcttgaccgacttgtttaaccagttggtgcaacaacgc
gaagccttgcgggaagaaatggatgtacgggttgccgaggctgctcgtaataccgaacag
gaaaaaaaccgcctcgccgcgctgatgtcggaactcaccaaaagcgtggtggtgtgcaat
ctcgatgggcgcattttgctgtacaacaaccgggcgcggatgcagtttcgcaagctctcg
caagcacccggtgtggcgggcggtggcgagttgatcggcttggggcgttcggtttacggc
gtgtttgatcgtaagttggtggcgcacgcgctggaaaatatccagcaccgtttgcagcgt
ggggcagccgcgccttccgcacaattcattactaccacgccgtcggggcagttgttgcgg
gcgcaaatggcgccggtacgtgccgtgcaggaagctgataccgccgctccggcgacaatg
acgggtttcgtgttgatgctggataatattacccgcgaatttgaagcacaggcgcgtcag
gatcatatcctgcataccctgaccgaacgcagccgtgccgcgctgggcaatatgcaggcc
gcgctggacgtgctggaataccccgatgtggaacccgagatgcgtgagcgcttgctgacg
gtattgcgggaagaaacgggtgggctgggcaaccgtttgcgcgaactcaagtcttcagcg
ctggatagcacggtattgcgttggccgttggaagacatgctgggcgcggatttggtggcc
gccgccatccgccgcattgaagccttgggtggtttgacggcggtggaagccggggtcgat
gattcgctgtggctgaaagtggaaagcttctcgctgttgcaagctttgtcctaccttgcg
gaacgtttgcggcaagaatgcgtgatcagcacggtgcaattgcgcctgagcatgggtaca
ggccgcgcccaactcgatttgtgctggacgccaagcgccgccaagctgaccgataaagtc
gtgccgggttgggaacatgatccaatgcgttccgggggcgaagatacctcgctgacgatt
caggatgtggtggaacgtcacggtggcgcgttctggtttgaacgcgagcctgagacgggc
acaacctttttccgcttcctgttgccgctggcagcaccgcaagagcaactcgattccgcc
agtctggtgcagaatgagagccgcccggaatattacgatttcgacctgttccaaccatcc
gcgcaaagccgttctttggaagacagccgtttgagcgagttgtcgttcacggtgtttgat
acggaaaccaccgggcttgacccggccaatggtgatgaaatcatccagattgcagcggtg
cggattgtgaatggcaagctgttgcgcaatgagaattttgaccaactggttgacccgaaa
cgtaatattccagcgattaccatcccgattcacgggattacgccggaaatggtgcacggg
cagccgacgatcgacaaggttttgcctgctttccatcagtttgcgcaagacacggtgctg
gtggcacacaatgccgcgtttgatatgcgttgcttgcaggtgaaggaaaaagtcaccggc
ttggtgttcgatcatccggtgatggatacgctgctattgtcggcggtagtgcaccccaat
caggaatcgcatcggctggaggcgattactgaacgtttcaatatcaacattctggggcgg
catacggcgctgggggatgcaatggcgacggcggaagtgtttatgcacttgatcccgtta
ttagaggaaatgggtatttatacgctggggcaggcgcgggaagccgcccagaaaacctat
tatgcgcgtttgaaatattag
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