Thiothrix litoralis: J9253_15135
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Entry
J9253_15135 CDS
T07754
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo00300
Lysine biosynthesis
tlo00470
D-Amino acid metabolism
tlo01100
Metabolic pathways
tlo01110
Biosynthesis of secondary metabolites
tlo01120
Microbial metabolism in diverse environments
tlo01230
Biosynthesis of amino acids
Module
tlo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J9253_15135 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J9253_15135 (dapF)
Enzymes [BR:
tlo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J9253_15135 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QTR48447
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Position
3114700..3115539
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AA seq
279 aa
AA seq
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MLNGELYFTKMHGLGNDFVVLDGISQSVKLSAAQIRQIADRHRGVGCDQLLLVEAYEGDD
AEFRYRIFNADGSEVEQCGNGARCFARFVYDQGLTQNTTIPVMTASGRIVLQIQPDGQVK
VNMGVPELAPAQIPFVSEQRQTLYTLEVKGAAVSLAAVSMGNPHAVLQVVALESAPVGTL
GALLEVHPAFPKRVNVGFMQVVGRDAIRLRVFERGCGETLACGTGACAAVVAGRLQGLLD
DQVTVSLPGGDLQIQWQGEGQPVWMTGPAATVFRGTLIV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacggcgaactgtatttcactaaaatgcatggtctaggcaatgatttcgtggtg
ctggatggtattagtcagtcagtcaagttgagtgcagcgcaaatacgccagattgctgac
cgtcaccgtggcgttggttgcgaccagttgctgttggtggaggcttatgagggggatgat
gctgagtttcggtatcgaatttttaatgccgatggcagcgaggtggaacagtgtggcaat
ggtgcacgctgttttgcgcgtttcgtgtatgatcagggtttgacgcagaacaccacgatc
ccggtcatgaccgccagcgggcgcattgtgttgcaaatccagcctgatgggcaggtgaaa
gtgaacatgggcgtgcctgagcttgcgcctgcacagattccgttcgtttccgaacagcgc
caaacgctctatactctggaggttaagggcgctgcggtatcgctagcggctgtttcgatg
ggaaatcctcacgcggtgctgcaagtagtagcactggagtctgcgcctgttgggacattg
ggggcgttgttggaagtgcatccggcattccccaagcgagtcaatgttggtttcatgcag
gtcgtcgggcgggatgccatccgcttgcgggtgtttgagcgcggttgcggcgaaacgctg
gcgtgtggtacgggtgcttgcgccgcagtggtggctgggcgcttacaaggtctgctggat
gatcaggtgacagtaagcttgcccggtggcgatttacagattcagtggcaaggcgaaggg
cagccggtatggatgaccggcccggcagcaacggtattcaggggaacactcatcgtatga
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