Thiothrix litoralis: J9253_18870
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Entry
J9253_18870 CDS
T07754
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
tlo
Thiothrix litoralis
Pathway
tlo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J9253_18870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tlo02022
]
J9253_18870
02035 Bacterial motility proteins [BR:
tlo02035
]
J9253_18870
Two-component system [BR:
tlo02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
J9253_18870
Bacterial motility proteins [BR:
tlo02035
]
Pilus system
Twitching motility proteins
J9253_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_23
HTH_28
Pre_tape_measure
Mg_chelatase
FleQ
VpsR
AAA
HTH_50
NB-ARC
DUF3885
Motif
Other DBs
NCBI-ProteinID:
QTR46020
UniProt:
A0ABX7WYP2
LinkDB
All DBs
Position
complement(3893483..3894910)
Genome browser
AA seq
475 aa
AA seq
DB search
MTEQTVLIIDDEPDIRELLEITLLRMGLDTVTAGDVQTALDKIEQHQPNLCLTDMKLPDG
NGIDIVRYLQKHHPHIPVAVITAFGSMDTAVEALKAGAYDFVSKPVDLPKLRELIQTALK
LSAGKAHQTVPDDDNSATHGSSILGNSPAMQQLKGTIHKLARSQAPVYIHGESGSGKELV
AHQIHQQGSRVKAPFVPVNCGAIPENLMESEFFGHKKGSFTGAVADKQGLFQAAHKGTLF
LDEVADLPLTMQVKLLRAIQEGAIKPVGGLEETAVDVRILSATHKSLEHEVAAGHFRQDL
YYRLNVIKLKVPPLRERQEDILLLADFFLKKIAKRWQMPPIRLSQAARDELASYAFPGNV
RELENVLERASTLCDNNTIQPDDLQLPTATADAIVAPHPSLRLRPGNDEGMEDKKGKIEV
ETLPAWNPVDEEAERDLILRALEQTRWNRTKAAEVLGMSFRQLRYRIQKYGLDEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacaaactgtactgatcatcgacgatgaacctgatatccgcgaattgctggaa
atcaccctgttgcgcatggggctggataccgtcacggcgggcgacgtacaaaccgcgctc
gacaaaattgagcaacaccagcccaacctgtgcctgaccgacatgaagctgcccgacggc
aacggcatcgacattgtgcgttacctgcaaaaacaccacccgcacattccggtcgccgtg
attacggcgtttggcagcatggataccgccgtggaagccctcaaagccggggcttacgat
tttgtatccaaacccgtggacttgcccaaactgcgcgaactaatccaaactgcactgaaa
ctgtcagcgggcaaggcacaccaaaccgtgcctgatgatgacaacagcgccactcacggt
agcagtattctggggaattctcccgccatgcagcaactcaaaggcaccatccacaaactg
gcacgcagccaagcaccggtgtacattcacggcgaatccggcagcggtaaggaattggtc
gcgcaccagatccaccagcaaggctcccgcgtcaaagccccgtttgtgccggttaactgc
ggtgctattcccgaaaacctgatggaaagcgaatttttcggacacaaaaaaggcagcttt
accggcgcagtcgccgacaaacaaggcttgtttcaggccgcccacaaaggcaccttgttt
ctggatgaagtcgccgatttaccgctgaccatgcaggtcaaactcttgcgggcgattcag
gaaggtgctatcaaacccgtcgggggtttggaagaaaccgccgtggacgtgcgcatcctc
agtgccactcacaaaagtctggaacatgaagtggcagcagggcatttccgccaggatttg
tattaccgcctgaacgtcatcaagctaaaagtgccgccattgcgcgaacgtcaggaagac
atcctgctgctggcagattttttcctgaaaaagattgccaaacgctggcaaatgccgccg
atccggctctcgcaggcagcacgcgatgaactggccagctatgcctttcccggcaatgtg
cgcgagctggaaaatgtgctggaacgggcgagtaccctgtgcgataacaatacgatccag
ccggatgatttgcagttgccgacagcaacggctgatgccattgttgctcctcatccctcg
cttcgactgcgcccagggaacgacgaggggatggaagacaagaagggaaaaatagaggtg
gagacgctgcctgcgtggaatccggtggatgaggaagcagaacgcgatttgatcctgcga
gcgctggagcaaacccgctggaaccgcaccaaggcagcggaagtgctggggatgtcattc
cgacaattgcgctaccggattcagaagtacgggctggatgaggggtaa
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