Thiothrix litoralis: J9253_19380
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Entry
J9253_19380 CDS
T07754
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
tlo
Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlo03009
]
J9253_19380
Enzymes [BR:
tlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
J9253_19380
Ribosome biogenesis [BR:
tlo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
J9253_19380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QTR46111
LinkDB
All DBs
Position
4001166..4001849
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AA seq
227 aa
AA seq
DB search
MRLDQFVSQAAAITRVDAQQAIRCGWVDVEGKTITKTSTHIDPTAAVTLDDALITLPGDI
YLMLHKPAGVVSATEDPEHQTVLDLIDHPHRKTLRIVGRLDKDTTGLLLLTNDGDWLHRI
TAPKSHVPKTYLATLAWALTEEGAEQLRAGVQLHGEKGLTKPAEVEILPDQQARITISEG
KYHQVKRMFAAVGNRVGSLHRERIGEWVLDAALAPGEWKVLNLDSSD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagatcagttcgtcagtcaagccgccgccattacgcgggtggatgctcaacaa
gccattcgttgtggttgggtggatgttgagggtaaaaccatcaccaaaacctctacgcac
attgacccaacagcggcagtgacgttggatgatgcgttgattaccttgccgggtgatatt
tatttgatgttacataaaccggcaggtgtggtgagtgccacggaagaccctgagcatcag
accgtgttggatttgattgatcatccgcaccgcaagacgctgcggatagtggggcgtttg
gataaggatacgacaggtttgttgctgttgaccaatgatggcgactggttgcaccgcatt
actgccccgaaaagccatgtgccgaaaacctatctggcaacgctggcatgggcgctgacg
gaagagggcgcggaacagttacgcgccggggtgcaattgcatggcgaaaaggggctgacc
aagcctgcggaggtggaaatcctgcccgaccagcaggcgcggatcacgatttccgaaggc
aaataccatcaggtgaagcgtatgtttgcggcagtgggaaatcgggtggggtcgctgcat
cgcgagcggattggtgaatgggtgctggatgcggcgctagcaccgggagaatggaaggtt
ctgaacctggattcgtcggattaa
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