Thiothrix litoralis: J9253_19475
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Entry
J9253_19475 CDS
T07754
Name
(GenBank) cadherin domain-containing protein
Organism
tlo
Thiothrix litoralis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IgGFc_binding
Cadherin
TSP3_bac
TSP_3
Motif
Other DBs
NCBI-ProteinID:
QTR46128
LinkDB
All DBs
Position
complement(4023457..4028895)
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AA seq
1812 aa
AA seq
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MAASPVFAAGSCEGAGGSGGRQFWLGVLGNYSNAGTIHLNLVGKEGTTGTLSSKDGSWSL
NYTVPASGFFETDLPNIFQVSGDGVILNNGLKITGSNDVSAYIINEQTYTTDGFLGYPTT
ALGKEYYVIGYNGLNATAPSRGMVVASQDNTSLTVTKPGGSPVNITLNEGQVYSFENGVN
DITGSHVTADKPVSVFGGAACANVPVGVTSCDTLVEQMLSVKDWGVEYVVPPIPYGQMLR
VVAAEAGTEVYKDGTLVATLGAGGIWTGNATNNDTVHRFTTNGKKIQVAQYAVGAQFSGT
TDVDPAMGIVPSREIWLTRHVFKAQPNFANTLLIVSPTANTGNLKINGAAPATAPTWITV
PGTDLSWTKIVVAAGAMYTITNDVEIGITVFGGKEYESYMLPGNMGLGDFDLDNIRDPQD
CDADGDGILNSVEKTNALPGTNGDSDGDGLVDELDLDSDNDGIPDNIEAQSTSAYIPPSG
NISPSGLDSAYGTGLTPVDTDGDGIPDYLDQDSDGAGTSDTIEASITLANNDADNDGLDD
AVDTDDNNYGPPNAGITDVLNAYPKNGSEVNWRILGNHAPIISTGSGSDTYSINYPEGKT
GTAVDYDATDTDGETEGSGLTWLISGTDAALFDIDSNTGKIAFKAAPGWGTPKDAGANNV
YDVIITVTDATGEIDQQTLGITVTEIDTDGDGIGNSKDNDIDGDGIPNSVEGTADTDGDN
IQNQYDLDSDGDGIPDNIEAQTTTGYQAPSGTVAANGVDTAYGAGLTPVNTDGTDTPDYL
DTDSDNSGSNDTAEAGITLSGNDADKDGLDDAIDSDDAGFGSANAGITDVLATYPGNGSN
VYWRLVNAAPVIPNPAAIDYVEKTTAPAVDLAATDDTNSEGKGMVYSMTGGDDMALFAID
PATGELTFKTTPNFAVPADKDGNNTYLVEVAAADAEGAITKKLLTITVLKDTDHDGIGDK
NDLDVDGDGIPNSVEGTGDIDGDSIQNQWDLDSDGDGIPDNIEAQTTAGFKAPSGVDADK
NGIDDAYGAGLTPVDTEGDGKQDYLDLDSENTGGDDNTESDVPVLSGLDADHDGLDDTID
TDPTSFGPANAGITDVLAAYPKTGAEVNWRIPNTPPVFTSPTAATLDENSTAVALNVEVT
DDKNKESDFTIGYSIVGSDDDARFTIDPKTGDIKFKLVPDYEKPIDKDKSNSYILTVKAC
DMEGGCSNQTITINVIDVDEDNDNDGLMDSKEKLLGTDPWNPDSDGDGLKDGEEVNTLKT
DPLKADSDGDGLSDGDEVLKSKTDPLKKDTDDDGVNDKAEVGADPTKPVDTDGDGTADAF
DTDDDNDGVLTKDEAPDANGDLSPDDALDTDKDGIPNYLDKEDDGDGVLTQYEDPAGKRD
TDKDGILDYLDEDDDGDGLLTEYEQADPNGDGNPADTRDTDKDGLPDYLDNDDDGDGVLT
KYEMADKDGNGNPTDATDTDGDGKFNWLDVDDDNDGILTKYENPDPNKDGNPADAQDSDK
DGKPDFLDNDDDNDGKLTVDEKADKNKDGNPLDAYDMDADGIPSYLDPDEIPTVVLHVRG
FLQGAYNTADGLMRDDLRKLGLIPSVQPYTDAVTSLGYVGTETAAPAVLATADNNAPVDW
VVVEIRDKTTPKTVVTRVAALLQRDGDVANPQTNEVKLLIPNVVEGQYYVTLRHRNHLGV
MTKDAVLLSPTLAAIDFGLPSQTVSGTNARLQGTDVSLMWAGEANNSDSIIANGPGNDTN
VVLGTVLMHPTNLLTNSNFRLKGYYVTDLSLDGTTIYSGPSNDINLLLGNVLLHPANSLF
AANYIMAGSLPK
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
ttggcggcatcacccgtctttgctgcgggaagctgtgagggtgctggcggctcaggaggc
cgacagttctggctgggcgtgctgggcaactatagcaatgcaggcacaatccaccttaac
ctggttggcaaagagggcacaactggcacactcagcagcaaagatggcagttggtcgttg
aactacaccgtccctgcttctggcttttttgaaacagacttacccaatatttttcaggtc
agtggcgatggggtcatactcaacaacggcttgaaaattaccggcagcaatgatgtttca
gcctatattatcaacgaacaaacctatacgacagacggttttctaggctacccaacaact
gccttaggcaaggaatactacgttattggttataacggcctcaatgccacagcaccttca
cgcggcatggttgttgcttcacaagacaataccagtttgacagtgacaaaaccgggtggc
tccccagtcaacatcaccctgaatgaagggcaagtctattcttttgaaaatggtgtcaac
gacattactgggtcacatgtcactgccgataaacctgtgtcggtcttcggcggcgcagct
tgcgcgaatgtccctgttggcgtgacatcctgtgacacattagtagagcaaatgttgtcg
gtgaaagactggggtgtggagtatgtcgttccccctattccctacgggcaaatgttgcgg
gtagtggcggctgaagcaggtactgaagtctataaagacggcactctcgttgcaacatta
ggtgcaggtggcatttggacaggcaatgcaaccaataatgacacggtgcaccgcttcacc
actaacggtaaaaagattcaagttgcccaatatgcagtgggcgcacaattcagtggtaca
accgatgttgacccagcgatgggaattgtgccttctcgcgaaatctggctaacccgccat
gtatttaaagcacaacccaacttcgccaataccttgttgattgtctcaccaacggccaat
acgggtaatttaaaaatcaatggcgcagcacccgctacggctcctacttggataaccgta
cccggcactgatttatcatggacaaaaattgtggtggcagcgggcgctatgtacaccatc
accaatgatgtcgagattggaattaccgtattcggcggtaaagagtatgaatcctacatg
ttaccaggcaatatgggcttgggtgacttcgaccttgataacatccgcgacccacaggac
tgtgacgcagacggtgacggcatcctcaactccgtggaaaaaaccaatgctttaccgggc
acgaatggcgactcagatggcgatggtctcgtggatgaactggacttggacagcgacaat
gacggcatccccgacaacatcgaagcccaatccaccagtgcttacattcccccatctggc
aacatatccccatcaggtttagatagcgcctatggtacaggcttaaccccagtggatact
gacggcgatggcattcccgattaccttgatcaggattctgatggggcaggaaccagtgac
accattgaagctagcattacattggcaaacaatgatgcggataatgacgggctggatgat
gccgtagacacggatgacaataactatggccctcccaatgcaggtattaccgatgtcctg
aatgcttacccaaaaaatggctcagaggttaactggcggatactcggcaaccatgcaccg
atcatttccacaggcagcggcagcgacacatacagcatcaattatcctgaaggcaaaacc
ggtacagcggtggattatgacgctacagatacggatggtgaaaccgaaggctctggccta
acctggttaatcagcggcacggatgctgctttatttgatattgactcgaatacagggaaa
atcgcattcaaagctgcgccaggctggggtacacccaaagacgcaggcgcaaacaacgtc
tatgacgttatcatcaccgttaccgatgctaccggcgaaatcgaccaacaaacgttgggc
ataacagtgaccgaaatcgacaccgacggtgatggtattggtaattcaaaagacaacgac
attgacggtgatggcatccccaatagcgtggaaggcacggctgataccgatggtgacaac
atccagaaccagtatgacctcgactccgacggtgacggcatccctgacaatatcgaagcg
caaaccaccacaggctatcaagcaccttctggcacggtcgctgccaatggggttgatacc
gcctatggcgctggcctgacgcctgtcaataccgacggcaccgatacaccggactatctg
gataccgattccgacaacagcggctcaaacgacaccgcagaagcgggcattaccctgtct
ggcaacgatgcagacaaagacggtctggatgatgctatcgacagtgatgatgcaggtttt
ggctctgccaacgcgggcattaccgatgtactggcgacctaccccggcaacggcagcaac
gtttactggcgtttagtgaatgctgctccggtcatccccaaccctgctgctatcgactac
gtggaaaaaaccacggctccagcggttgaccttgctgccaccgatgacactaacagtgaa
ggcaaagggatggtttacagcatgacaggtggggatgatatggcactgtttgccattgac
ccggcaacaggtgaactgaccttcaagaccaccccaaactttgcagtccctgctgataaa
gacggcaacaacacctacttggtggaagtagccgctgctgatgcggaaggcgcgatcacc
aaaaaactgttgaccattaccgtgctgaaagataccgaccatgatggcattggtgacaaa
aacgacctcgacgtagacggtgacggcatccccaacagcgtggaaggcacaggcgatata
gacggcgacagcatccagaaccagtgggatctggactccgacggtgacggtatccccgac
aatatcgaagcgcaaaccaccgcaggctttaaagccccatccggtgtggatgcggacaag
aacggtattgatgatgcttacggcgctggcctgaccccggtagataccgaaggcgacggc
aagcaagactacctcgaccttgattccgaaaataccggcggcgatgacaataccgaatcc
gacgtaccggtactttccggcctagatgctgaccacgatggtctggatgacaccattgat
actgaccccaccagtttcggcccggccaatgcaggcatcaccgatgtgctggcggcttac
ccgaaaactggcgcggaagtgaactggcggattccgaataccccgccggtattcacctca
ccaacggctgcaacgcttgatgaaaacagcaccgctgtggcactgaacgtggaagtcacc
gacgataaaaacaaggagtcagatttcaccatcggttacagcattgtgggttcggatgac
gatgcgcgtttcaccattgacccgaaaaccggcgacatcaagttcaaactggtgccagac
tatgagaaaccgatcgacaaggacaagagcaactcctacatcctcacagtgaaagcctgt
gacatggagggcggctgttccaaccagactatcaccatcaacgtgatcgacgtggatgag
gacaatgacaacgacggcctgatggattccaaggaaaagctcctgggtactgacccgtgg
aaccccgattccgatggcgatggcctgaaagacggtgaggaagtgaatactctcaagacc
gacccgctcaaggctgacagcgatggcgacggtttgtccgacggcgatgaggtgctgaaa
tccaaaaccgacccgctgaaaaaagacaccgacgatgacggtgtaaacgacaaggccgaa
gtcggcgctgacccgactaagccggtggataccgatggcgacggtacggcggatgcgttc
gatactgatgatgacaatgatggtgtcctgaccaaggatgaagcaccggatgccaacggc
gacctgagccccgacgatgcgctggataccgacaaggatggtattcccaactacctcgac
aaggaggacgatggtgacggcgtgctgacccagtacgaagacccggctggcaaacgtgat
actgacaaggatggcatcctcgactatctggatgaagacgatgacggtgacggcctgctg
accgaatacgagcaagcagacccgaatggcgacggcaacccggcggatacccgtgacacc
gacaaggatggcttgcccgactatctggacaacgacgatgacggcgatggcgtgctgacg
aagtacgaaatggctgacaaggacggcaacggcaacccgacggatgccaccgataccgac
ggcgatggcaagttcaactggctggatgtggacgacgacaatgacggtatcctcaccaaa
tacgagaaccctgacccgaacaaggacggcaatccggcggatgcacaggattccgacaaa
gatggcaaaccagacttcctcgataatgatgacgacaacgacggtaagctgacggttgac
gaaaaggccgacaagaacaaggatggcaatccgctggatgcctatgacatggatgcggat
ggtattccgagctacctcgacccggatgaaatccctaccgtggtgctgcatgtgcggggc
ttcctgcaaggcgcttacaacacggcggatggcctgatgcgcgatgacttgcgcaagctg
gggcttatcccaagcgtacagccatacactgatgcagtaacctcgctgggttacgtggga
actgaaaccgctgcaccggcagtgctggcaacagcagacaataatgcacctgtcgactgg
gtggtggtggaaatccgcgacaagacgacaccaaaaacggtggtgacacgcgttgccgct
ctgctccagcgcgacggagatgttgccaacccgcagaccaatgaggtcaagctgttgatc
ccgaacgtggtggaaggccagtactacgtgaccctgcgtcaccgcaaccatctgggggtg
atgaccaaagacgcagtattgctgtcaccaacactggcagccattgacttcggcttgccg
agccaaacagtcagcggcactaacgcccgtctgcaaggcacggatgtcagcctgatgtgg
gcgggtgaagccaacaacagtgacagtatcattgccaacggccccggtaacgacaccaac
gtggtgctgggtacggtgctgatgcacccgaccaacctattgaccaacagtaacttccgt
ttgaaaggctactatgtcactgatctgagtctggatggcacaaccatctactcagggcca
agcaatgacattaacctgctgttgggcaatgtgttgctgcatccggctaacagtttgttc
gcggcgaactacatcatggcggggtcgcttccaaagtaa
DBGET
integrated database retrieval system
