Thiothrix litoralis: J9253_19520
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Entry
J9253_19520 CDS
T07754
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo00300
Lysine biosynthesis
tlo00470
D-Amino acid metabolism
tlo01100
Metabolic pathways
tlo01110
Biosynthesis of secondary metabolites
tlo01120
Microbial metabolism in diverse environments
tlo01230
Biosynthesis of amino acids
Module
tlo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J9253_19520 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J9253_19520 (lysA)
Enzymes [BR:
tlo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J9253_19520 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTR46136
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Position
4035004..4036260
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AA seq
418 aa
AA seq
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MDHFEYRNGQLYAENVAVADIARAHGTPCYIYSRATLERHWHAFNDAFGSQAHLVCYAVK
ANSNLALLNLFARLGSGFDIVSGGELERVLRAGGDPSKVVFSGLGKKVPEIRRALEVGIR
CFNIESESELDRINAVAGEMGKVASISLRVNPDVDAQTHPYISTGLKENKFGIEIGRAEA
VYLKAAAMPHLKVVGIDCHIGSQLLTLTPFMDALQRLLALAERLAAQGVQIHHLDVGGGL
GVRYQEGQAAPSPADYMAQLFTDERLRQYEIFVEPGRAIAANAGILVTEVEFLKPSEYKN
FAIVDAAMNDLIRPALYSAWQEIIPVVPRSTGETVTYDVVGPVCETGDFLGKERDLNIQP
GDFLAVRSSGAYGFTMSSNYNTRPRAVEVMVDGDAVHVVRQRETLDDLLRGENILPIK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaataccgtaacgggcagttgtacgccgaaaacgtcgctgttgccgat
attgcccgtgctcatggcacaccatgctacatttattcccgtgctacgctggaacggcat
tggcacgctttcaacgatgcttttggttcgcaggcgcatttggtgtgttatgcggtaaag
gctaattccaaccttgccctgcttaatttgtttgcacgcttagggtcggggttcgatatc
gtatcgggtggcgagctggagcgtgtgttacgcgccggtggcgaccctagcaaagtggtg
ttttccggccttggcaaaaaagtacctgaaatccgccgtgcgctggaagtaggtatccgt
tgcttcaatatcgaatccgaatccgaactcgaccgcatcaacgcggtggcgggtgaaatg
ggcaaagtggcgtcgatttccttgcgcgtcaacccggatgtggatgcgcaaacccacccc
tacatttccaccggcttgaaagaaaacaagttcggcatcgagattggtcgcgctgaagcc
gtgtacctgaaagccgctgccatgccacacctgaaagtggtggggatcgactgccacatc
ggttcgcaattgctgacgctgacgccgttcatggatgccttgcaacgcttgctggccttg
gcggaacgcttggcggcacagggtgtgcagattcaccacctcgatgttggcggtggtttg
ggtgtgcgttatcaggaagggcaggccgcgccatcccccgcagactacatggcgcaattg
ttcaccgatgaacgtttacgtcagtatgaaatctttgtcgagccgggcagggcaattgcc
gcgaatgccgggattctggtgacggaagtcgaattcctgaaaccgtcggaatacaaaaat
ttcgcgatcgtggatgcggcgatgaatgacctgatccgccccgccttgtacagcgcttgg
caagaaatcattccggtggtgccgcgctcgacgggtgaaaccgtgacttacgatgtggtg
gggccagtgtgcgaaaccggtgattttttaggtaaagaacgcgacctcaatatccagccg
ggtgattttctggcggtgcgttcgtcgggtgcttatggctttaccatgtcatccaattac
aacacccgcccgcgtgcggtagaagtgatggtcgatggcgatgcggtgcatgtggtgcgt
cagcgggaaacgctggatgacttactgcgtggtgaaaatattttacccattaagtga
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