Tundrisphaera lichenicola: P12x_001013
Help
Entry
P12x_001013 CDS
T11482
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
tlq Tundrisphaera lichenicola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
GAF_3
DUF350
AAA_2
GAF
AAA_16
Xre-like-HTH
HTH_IclR
PDZ_6
SlyX
Motif
Other DBs
NCBI-ProteinID:
XXJ12918
LinkDB
All DBs
Position
complement(1302158..1305046)
Genome browser
AA seq
962 aa
AA seq
DB search
MAWTGNIGLNCVLGYEVKEAVAPDFIWKSARPSVGDILTGIDGHPIEHYPAYVAAMRDIR
DRVGDSVEVTWKSPTGGPEQHASAVVRYRPMRTYRWSLLWFIQEMAIFALGARVYWKRPR
DESALVFFLLCFASVGAYMGGYHWAEVVVEPFLIYGFAAFAVFVPVLSLHFYLVFPRLNP
IFERHRRTVLSTLYGVPVAFVGILWSFMFRLSLLRGGVGPDALVAVDATLAWIKYLAFGY
IALSVAVFGLCILCLNASYRSAVSRAERNQTYWILLASWLGVLPIGYLLWNAWWEPYRLG
LSSAAWPMYVVSLLYTVAYALSITRYRLMQVEEIYNRSKIYVVVSLAAGLLYSGVLVGTT
LLIGERLLTPHTSRGAVVMGGVVIVLLVLSGAIRERFQRVIDRRFYREKYKFDEAMQKMN
LAVGRLVDRTTLGQRLLEAAAEILRVEWGAIYLAEAPDQPLKLAAWHGPEPEVHSLPTDN
PLVNRLRENSTLRAPHAMALVPASDPATDTMIALGGEVAKALEADDLLVGLMVLGPKRSG
LAYEDEEVAFLGALGSVAMLALHSAGIQQTLERLNLELRDKVDKIAEQQRRILLLQDQLT
DRGKSASRLEPSDPVDPGVFEEIRGSGPAVLRMREVARKVAPSQAAVLIRGESGTGKELL
AQAIHAAGPRANRPFVRVHCAALSQGLLESELFGHVKGAFTGADGHRVGRFEQADGGTLF
LDEIGDINLEVQTKLLRVLQEMAFERVGSSQTIAVDVRIVAATHQDLESLIRAGRFREDL
FYRLNVIPIRTPSLRERKEDIFELAVHFLGRHAERMARSVGHIDDEAVEALISHDWPGNI
RELENVIERAVVLSEGPALTLADLPLEIREPGRRRGRFLVPAELRQITGRRTRGTSTVPG
VSGSSRSDEPEIDSEADAFERHRLLDALEEARGNKSEAARLLGLPRSTFFSKLKKHGLPA
QG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
gtggcctggactggcaacatcgggttgaattgcgtcttgggttatgaagtcaaggaagcg
gtcgcgcccgacttcatctggaagtcagccagaccttcggtgggcgacatcctgaccggg
atcgacgggcatccgatcgagcattatccggcttatgtcgcagccatgcgggatattcgt
gatcgagtgggggattccgtcgaggtgacctggaagtccccaacgggcggcccagagcag
catgcgtccgccgtcgtacgctatcgcccgatgcggacttatcgctggtctctcctctgg
ttcatccaggaaatggccatctttgcgctgggggctcgggtttactggaaaagaccgagg
gacgaatcggccctggtgttcttcttgctttgtttcgccagtgtcggcgcctacatgggg
ggatatcactgggccgaggtagtcgtcgagccgttcttaatttatgggttcgcggccttc
gcagtcttcgtgccagtcctcagcctccatttctacctggttttccccagactgaatccg
atcttcgagcgtcatcgaaggacggtgctgtcgacgctctatggagtgcccgtcgccttc
gtggggatcctctggtccttcatgttccggctcagtttgctacgaggtggagtgggtccc
gacgccctggtcgccgtcgacgcgacgctggcctggatcaagtacctggccttcggatac
atcgccctctcggtcgcggtcttcggcctctgcatcctctgcctcaacgccagttaccgg
tcggccgtgagccgtgcggaacggaaccagacctactggatcctcctggcttcctggctc
ggcgtcctgccgatcggctacctgctctggaacgcctggtgggaaccttaccggctcggg
ctctccagcgcggcctggccgatgtacgtggtttcgctgctctatacggtggcctatgcc
ttgagcatcacccgataccggctgatgcaggtcgaggagatttataaccggagcaagatc
tacgtcgtggtgagcctggcggcggggctcctctactcgggagtcctggtgggcaccaca
ctcctgattggcgagcgtctcctgaccccccacacctctcggggagcagtggtgatgggc
ggggtggtcattgtcctgctggtcctctcgggggcgattcgcgaacgatttcagcgggtg
atcgaccgccggttctatcgcgagaaatacaagttcgacgaggcgatgcaaaagatgaat
ctggccgttggtcgtctggtcgaccggaccacgctgggtcagaggctcctggaggcggcg
gcggagattctccgagtggagtggggggcgatctacctggccgaggccccggaccaaccc
ctcaagttagcggcctggcacggacccgagcccgaggtccattcgctaccgaccgacaat
ccgctggtcaatcggctccgcgagaattcgacgctccgggccccgcacgcgatggccctc
gtccccgcttccgacccggccaccgacacgatgatcgcgctgggaggcgaggtcgccaag
gcgttggaggccgacgacttgctggtcggcctgatggtcctggggccgaagcggagcggc
ctggcttacgaggacgaggaagtggcctttctcggggcgttgggctcggtcgcgatgctg
gccctgcattcggcgggaatccagcagacgctggagcggctgaatctggaactccgcgac
aaggtcgacaagatcgcggagcaacagcggcggatcctcctgctccaggaccagctcacc
gatcgcggcaagtccgcctcgcgactggaaccgagcgatccggtcgaccccggcgtgttc
gaagagatccgaggttcggggcctgcggtccttcgaatgcgggaggtcgcgcgcaaggtc
gccccgagccaggccgcggtcctcatccggggcgagagcgggaccggcaaggagcttctg
gcccaggcgatccacgccgccgggcctcgggccaaccgccccttcgtccgggtccactgc
gcggccctctcacaagggctgctggagagcgaattgttcggtcacgtcaaaggggcgttc
accggggccgatggccaccgggtcggccggtttgagcaggccgatggtggcactctcttc
ctcgacgagatcggcgacatcaacctggaggtccagaccaagctcctccgggtcctccag
gagatggcattcgagcgggtgggaagctcgcagacgatcgcggtcgacgtgcggatcgtc
gcggcgacccaccaggacctggaaagcctgatccgcgcggggcgttttcgcgaggatctc
ttctatcgcctcaatgtgatcccgatccgaacgccctcgctccgcgagcggaaggaagat
atcttcgagctggccgtccatttcctcgggcggcacgccgaaagaatggcccgctcggtc
ggtcacatcgacgacgaggcggtggaagctctgatctcccatgattggccgggcaatatt
cgcgagctggagaatgtgatcgaacgagcggtcgtgctctcggaaggcccggcgttgacg
ctggccgacctgccactcgagattcgcgaaccgggccgtcgccgaggtcgcttcctggtg
ccggccgaactcagacagatcaccggcaggagaacccgcgggacttcaacggtccccgga
gtttcgggatcgtcgaggagcgatgagcccgagatcgattcggaagccgatgcattcgaa
cggcaccgactgctcgatgccctggaggaggctcggggaaacaagagcgaggcggccagg
ctcctgggtctcccccgcagcactttcttcagcaagctgaagaaacacggtctgcccgcc
caaggctga
DBGET
integrated database retrieval system
