Tundrisphaera lichenicola: P12x_002050
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Entry
P12x_002050 CDS
T11482
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
Organism
tlq Tundrisphaera lichenicola
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
DUF6687
Motif
Other DBs
NCBI-ProteinID:
XXJ13888
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Position
complement(2608902..2612609)
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AA seq
1235 aa
AA seq
DB search
MATASTVRRITPERRRNFGKIYDIHPVPDLTEIQTRSYERFLQADLPAEERADAGLEGVF
REIFPIESYDKTLKLEYIKFDLGKPRYEPDECRQLRLSYGRPLHVWLRLNKGETALEESV
YLGDMPIMIGGGEFIINGAERVVVSQLHRSPGVDFVVDIEAGDKKLHACRVIPERGSWIE
LQVTKKDTLGVRIDQSGKFSSMTLLRAMSPMYSSDDAILQAFYDSEEIDTGETDAATRIE
GRIACGDIVDPNTGEVLIDSGSTISKVSAQVLADAKIGVISVLKDVKDQLILQSLQEDQT
TDHESALLRIYQRLRPGNPPQLEKAKELFHEKFFDTNRYRLGKVGRFRINRKFSQTVADD
QMILDPLDYVNAIRYILNLRKGKGHVDDIDHLGNRRLRTIDELAADELRKGFLKLRRTVQ
ERMSLKDAEDITPRSLINPKSISAAIEYFFGRGELSQVVDQTNPLAQLTHERRLSALGPG
GLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLGIYGGVDEYGFLVTPYREIKD
GHRTDHVVWMRADEESEAYLAPADAPTDEDGKLKGPHVIARYQTDFHTIPTEQVQFQDIS
PKQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVAEPPIVATGLEREVAMNSGMII
KAPHDATVTYVDATRIILDHNIIYKLRKYVGLNERTCLNQKPVVSPGQEVKKGEILADGA
ATYKGELALGRNVLVGFMAWDGYNFEDAIILSERIVKEDVYTSIHIEEFEIEIRETKLGR
EEFTRDIPNVSEKALRNLDENGIVRIGTYVKPGDILVGKVAPKSKSELTPEEKLLHAIFG
RAGEDVKNDSLEVPSGVEGIVINTQRFSRRMSLNEEERKNFEKELKDTEAAESVKIADEY
KQMIKALEEVLGGPVTDPTTGKPFGRDKDPKNLADESERFKLEALDLRSPEMAVEARKVV
RQYSPRIESLRDEKDRRLNSLKRGDELPSGVLQMVKIYIATKRVISVGDKMAGRHGNKGV
IAKILPEEDMPFLADGTAVEILLNPLGVPSRMNVGQILETHLGWAAAKLGFQALCPVFDG
ATEETIRQCLVDAGLPENGKAVLYDGRTGEKFDQRVTVGYIYMLKLHHLVDDKIHARATG
PYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTKIYESMV
KGENTLEAGTPASFDVLTNEIRGLGLNMQLEKKRI
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggccactgctagcaccgtgcggcgcatcacccccgaacggcggcggaacttcggcaag
atctacgacatccacccggttcccgacctgacagagatccagacccgcagctacgagcgg
ttcctccaggccgatctcccggccgaagaacgtgccgacgccgggctggaaggggtgttc
cgcgagatcttcccgatcgagagctatgacaagaccctcaaactcgaatacatcaagttc
gacctgggcaagccccgctacgagcccgacgagtgccgccagcttcgcttgagctacggt
cgaccgctccacgtttggctccgcctcaacaagggcgagaccgccctggaggagtcggtc
tacctcggtgatatgccgatcatgatcggtggcggggagttcatcatcaacggtgccgag
cgcgtggtcgtcagccagctccaccggagcccgggcgtcgacttcgtcgtggatatcgag
gccggcgacaagaagctgcacgcctgccgggtcattcccgaacgcgggagctggatcgaa
cttcaggtcacgaagaaagacacgctcggcgtccggatcgaccagtcaggcaagttctcg
tcgatgacgctgctccgggcgatgagcccgatgtattcctccgacgacgcgatcctccag
gctttctacgactccgaggagatcgacaccggcgagaccgacgccgcgactcggatcgaa
ggccggatcgcctgcggtgacatcgtcgacccgaatacgggcgaggtcttgatcgacagc
gggtccaccatctcgaaggtctcggctcaggtcctcgccgacgccaaaattggggtcatc
agtgtcctgaaggacgtcaaagatcaactgatcctccagtcgctccaggaagaccagacc
accgaccacgagagcgccctgctccggatctaccagcggctccggccgggtaatccgccc
cagctcgagaaggccaaggaactgttccacgagaagttcttcgataccaatcggtatcgg
ctgggcaaagtcggccgattccggatcaaccggaagttcagccagacggtcgccgacgac
cagatgatcctggatccgctcgactacgtcaacgcgattcgctacatcctcaatctccgc
aaggggaaggggcatgtggacgatatcgaccacttgggcaaccgacgactccggaccatc
gatgaactggctgccgacgaacttcgaaaggggttcctcaagctccgccggaccgtccag
gagcggatgagcctgaaggatgccgaggacatcacccctcggagcctgatcaatcccaag
agcatcagcgcggcgatcgaatatttcttcggccgaggcgagctttcgcaggtcgtcgac
cagaccaaccccctcgcccagctcacccacgagcggcggctttcggccctcgggccgggc
ggcctgaaccggaagcgggccggcttcgaggtccgcgacgtccacatctcccactatggc
cggatctgcccgatcgagacgcccgaagggacgaacatcggcctgatcagctcgctcggg
atctatgggggtgtcgacgagtacggcttcctcgtgaccccttaccgagagatcaaggac
gggcaccggaccgatcatgtggtctggatgcgtgccgacgaggagagcgaggcttatctg
gccccggccgatgccccgaccgatgaggacgggaagctcaagggaccccacgtcatcgcc
cggtatcagaccgacttccacacgatcccgaccgaacaggtccagttccaggatatctcg
cccaagcagatggtgggcgtctcggccggcttgatccccttcctggagcacgacgacgcc
aatcgggccctgatgggctcgaacatgcagcgtcaggcggtccccttgctcgtggccgag
ccgccgatcgtggcgaccgggctggagcgtgaggtcgcgatgaactcggggatgatcatc
aaggctccgcacgacgcgacggtcacgtacgtcgacgccactcggatcatcctcgaccac
aacatcatctacaagcttcgaaagtatgtcgggctgaacgagcggacctgcctgaaccag
aagccggtggtctctcccggccaggaggtcaagaagggcgagatcctggccgacggagcc
gcgacctacaagggagagctggccctgggccggaacgtcctggtcgggttcatggcctgg
gacggctacaacttcgaggatgcgatcatcctctccgagcgaatcgtgaaggaggacgtc
tacacgtccatccacatcgaggagttcgagatcgagattcgcgagaccaagctcggccgc
gaggagttcacccgcgacatccccaacgtctcggagaaggccctccgaaacctcgacgaa
aacgggatcgtccggatcgggacctacgtcaagcccggcgacatcctggtgggcaaggtc
gctccgaagtccaagagcgagctgactcccgaggaaaaactgctccacgcgatcttcggg
cgggccggcgaggacgtcaagaacgacagcctcgaagtcccctcgggtgtcgaaggcatc
gtgatcaatacccagcggttcagccgccggatgagcctcaacgaagaagagcgcaagaac
ttcgagaaggagctgaaggacaccgaggcggccgagagcgtcaagatcgccgatgaatac
aagcagatgatcaaggcgctcgaggaagtcctcggcggaccggtcaccgacccgaccacg
ggcaagccgttcggccgcgacaaggatcccaagaacctggccgacgagtccgaacggttc
aagctcgaggcgctcgacctccggagccccgagatggccgtcgaggcccgcaaggtggtc
cggcagtactcgccgaggatcgagtcgctccgcgacgagaaggaccgccggctcaacagc
ctgaagcggggcgacgagcttccttcgggcgtcttgcagatggtcaagatctacatcgcg
accaagcgggtgatctcggtcggcgacaagatggcgggtcgtcacgggaacaagggggtc
atcgccaagatcctccccgaggaggatatgcccttcctcgccgacggcaccgccgtcgag
atcctgctcaacccgctgggcgtgccgagccgcatgaacgtgggtcagatcctggagacc
cacctgggctgggccgcggccaagctcggattccaggccctctgcccggtgttcgacggg
gcgaccgaggagacgatccgccagtgcctggtggacgccggcctgcccgagaacggcaag
gcggtcctctacgacggccggacgggcgagaagttcgaccagcgcgtgacggtgggctac
atctacatgctgaagctccaccacctggtcgacgacaagatccacgctcgggccaccggc
ccctactcgctgatcacgcagcagcccctgggcggcaaggcccggttcggcggccagcga
ttcggcgagatggaagtctgggcgctcgaggcctacggggccgcctacatcctccaggag
ttgctcaccgtcaagagcgatgacgtcgaggggcggaccaagatctacgagtccatggtc
aagggggagaacaccctcgaagccggcacccccgccagtttcgacgtcttgaccaacgag
atccgcggcctcgggctcaacatgcagctcgagaagaagcggatctga
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