Tundrisphaera lichenicola: P12x_003690
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Entry
P12x_003690 CDS
T11482
Name
(GenBank) DEAD/DEAH box helicase
Organism
tlq Tundrisphaera lichenicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
WHD_4th_Lhr
WHD_3rd_Lhr
Helicase_C
WHD_2nd_Lhr
ResIII
AAA_25
HTH_9
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XXJ09805
LinkDB
All DBs
Position
4690351..4694847
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AA seq
1498 aa
AA seq
DB search
MSDPDGLELLLPAVAGWFRENFGRPTPPQRLGWPEIAAGRHTLLFAPTGSGKTLAAFLAC
LDHLWRVPRQSKGVRILYISPLKALNNDIYRNLQVPLDGIIAEAETRGSSLPPLTVAVRT
GDTPTSDRQRMLRKPPDVLITTPESLHLLLTSKARENLGSLSHVIIDEIHALCPNKRGVF
LALLLERLEAINPGGFVRVGLSATQRPLEEVAGYLGGLRRIEGEGPSRFEPRPVSIVDAG
RRKDLDLRVIAPFDRSRPQPEGSIWPEIERRLLDLIREHHSTIVFANNRRVVERLTNHLN
ELAGADHPVEVDPDLPPVVVAKAHHGSLSQEERRETEEALKRGDLPSVIATASLELGIDM
GAVDLVCQVGSPGGVARGLQRVGRAGHVVGRVSKGRMIARTTADLLESAAMARAMIANEV
ETLRVPTNCLDILAQQVVAAVAIDNWDVSALYDRVRCAYPYRDLSAEAFEGVLRLVSGRF
PTATFRDLQARVSWDRVRNRLHPLPGTSRLAITGGGTIPDTGQYPLFLGEGGPRLGELDE
EFVLERRVGETFVLGTSTWKIDAIEAHKVVVSRAVGQAAVMPFWRGEGISRTLELGKKIG
ALCREIAERRDDPQALVWLQEECCLEPSAASTLRDHVARQIRVAGAIPDDRTVIVETFRD
PAGEVGLAVLSPMGGKLHQALKLALQGRLRQRLGVTPACLHADDGLLIRLPRTENPPLDL
FLGLTSTLADELIRAELGDSALFGLRFRQNAGRALLMPRPDPSKRTPLWLQRLRAKDLLQ
VVRKMPDFPIVVETYRECLVDDLDLPSLRIFLDEIASGKIRVVTREGEIPSPFANDLIFK
FTQSFLYQWDEPQRAPASGGDPIDPGLLDSLLEPAAIGRVEASLRGAGRPPRSIEEMAEA
LRRLGDLTADELNGPMAGFFEELRAQGRAFRIEIEGTADPSRWIGDEDRALYDLAFAEYQ
PPSSRAGRGKRSSPDPARKPDVRDSLVVSNRDLEETRNDAISRIVRRFLRTHALIGLDQL
TARYPIGPALATDLLERFADEGSLIRLDPVGGSESPRWADRQNLEEVRRLSIAIRRRESV
AIAPEAFADFVVRRQQVHPETRREGPLAVSLVIEQLQGFAGSAGLWETEILPRRVKDYRP
AWLDETLGSGEWTWRAEADGRGDPRVAFVPRDFAGTWPTREESAESGAHSILVLDHLTRR
GASFVADMARVTGLGPLAVRSELESLLRRGMVTNDRFDPLRPGGQAMAEALSAASSRSKP
GRASIRRGASRRPEGRWSILSASPSDDPEGSALAWAWALIERYGILARETVELDPWAPPW
RDLAPWLARSELRGELRRGYFVEGLSGVQYTIPEVVEELARSSSRSVSEGVPVLLSTLDP
ANLYGAGAPLDIPLLEGGTARLARNSSNFLVLITGRPVLIIEGHGRRLTGLASASELDLK
SAIALLPTLAGPTRRVLKVESYNTAATLSSPAVPWLTEVGFVRDFPGMAFYAGWSSES
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcccgacgggcttgagttgctcctgccggcggtcgcgggatggttccgggaa
aatttcggacgccccactccccctcaacgtctcggctggcccgagatcgctgccggtcgc
cataccttgcttttcgccccgacgggctcgggcaagactctcgcggcctttctggcctgc
ctcgatcatctctggcgagtcccgagacaatccaaaggcgtccggatcctctacatctcg
ccgctgaaggcgctgaataatgatatctaccggaatctccaggttccgctggatgggatc
atcgccgaggcggaaacacggggctcttcccttcccccattgacggtcgcggtccggacc
ggcgataccccaacttccgatcgtcagcgaatgctccggaaaccgcccgatgttctcatc
acgacgcccgaatccttgcaccttctgctcactagtaaggcacgagagaatttgggctcg
ctctctcacgtgatcatcgacgagatccacgccctctgcccgaacaagcgaggagttttt
ctggccctcctgctggagcggcttgaagcgattaatccgggtgggtttgttcgagtagga
ctctcggccacccaacgtcccctggaggaggtggccggctacctgggcggtctccggcgg
atcgagggcgagggaccaagccgtttcgagccgaggccggtctcgattgtggatgccggc
cggaggaaagatctcgacctccgggtgatcgcaccgttcgatcgttcccggccgcaaccc
gaggggtcgatttggcccgagatcgagcgtcgattgctggacctgatccgcgagcatcac
tccacgatcgttttcgccaataaccggcgagtcgtcgagcgtctgaccaaccacctgaat
gagttggccggggccgaccatcccgtcgaagtcgatccggacctccctccggtcgtcgtc
gctaaggcccatcacgggagcctgagccaggaggagcggagggagaccgaggaggccctg
aagcggggcgatctgcccagcgtgatcgcgacggcctctctcgaactcgggatcgacatg
ggggcggtcgacctggtctgtcaggtcggatctcccggcggagtcgcacggggtctccag
cgagtgggccgggccggtcacgtggtcggccgcgtcagcaagggccgcatgatcgcccgg
acgaccgccgacctcctcgaatccgccgcgatggcccgggccatgatcgccaacgaggtc
gagacgctccgtgtacccaccaattgtctggatatcctggcccagcaggttgtggccgcc
gtggcgatcgacaactgggatgtctcggcgctttatgaccgggtccgatgcgcctatcct
tatcgagacctgtccgccgaggcattcgaaggggtcctgagactggtttccgggcgattc
ccgaccgccaccttccgcgacctccaggccagggttagctgggaccgggtccggaaccgt
ctgcatcccctgcccgggacgagtcggctggcgatcacaggaggcgggacgatccccgac
accggccagtatcccctctttctaggcgagggcgggcccaggcttggcgaactcgacgag
gaattcgtcctggaacgaagagtcggcgagaccttcgtgctgggcacctcgacctggaag
atcgacgcgatcgaggcgcacaaggtcgtcgtttcccgggccgtgggccaggccgccgtg
atgcccttctggcggggagaagggatctcccggactctggaacttggcaagaagattggg
gcgctttgccgggagatcgccgagcgtcgggacgatccccaggctctggtatggctccag
gaggaatgttgcctggaaccctcggcggcctcgaccctcagggaccacgtcgcccggcaa
atccgggtcgccggggccatccccgacgaccggacggtgatcgtcgagacgtttcgcgat
cccgccggagaggttgggctagccgtcctctcgccgatgggcggcaagcttcaccaggcc
ctcaagctggccttgcaggggcgacttcgacaacgactcggcgtgaccccggcctgcctc
cacgccgacgacggcctcttgatccgattgcccaggaccgagaaccctcccctcgacctc
ttcctcggactgacttcgaccctggctgatgaattgatccgtgccgaactcggcgacagc
gccctgttcggactccggtttcggcagaatgccggccgtgccttgctgatgccgcggccc
gacccgtcgaagcggaccccgctctggctccagcggctccgggccaaggatctgctccag
gtcgtccggaagatgcccgatttccccatcgttgttgagacgtaccgcgagtgcctggtg
gacgatctggatctgcccagtctccgaatcttcctcgacgagatcgcgtccggaaagatt
cgggtggtcacgcgggagggggaaataccctcgccattcgccaatgacctgatcttcaag
tttacccagtcgttcttgtaccagtgggacgaaccccagcgggcccccgcctcgggggga
gatccgatcgatcctggcctgctcgactcactcctcgaaccggccgcgatcggacgggtc
gaggccagtctccgaggggcaggccgcccccctcgatccatcgaggagatggccgaagcc
ttgcgtcgtctcggcgatctcacagccgatgagttgaacggcccgatggcggggttcttc
gaggaactccgggctcaggggagggcattccggatcgagatcgagggaactgcggatccc
tctcgctggatcggtgacgaagaccgggcgctctacgatctggccttcgccgagtatcaa
ccaccctcgagccgagccgggcgggggaagagatcctctcctgatccggcacgaaagccc
gatgttcgcgattcgctcgttgtcagcaatcgggatctggaagagactcgtaacgacgcc
atctcccggatcgtccggcgattcctcaggactcatgccctgatcggcctcgaccaactg
acggcgcgttatccgatcggaccggccctggcgacggatctcctggaacggttcgccgac
gaagggagcctgatccggctcgacccggtcggagggtccgagtcgcctcgatgggccgac
cggcagaatctggaggaggtccgtcggctctcgatcgcgatccggaggcgagagagtgtg
gcgatcgcaccggaagcgttcgcggatttcgtcgttcgccggcagcaggtccacccggag
acccgtcgcgagggacctctggcggtatcactggttatcgagcagcttcaaggattcgcg
gggtcggccggactctgggaaaccgaaatcctgcccagacgcgtgaaggattatcgcccc
gcctggctggacgagacgctcggctcgggcgagtggacctggcgagccgaggccgatggc
cggggcgatccccgggtcgccttcgtcccgagggatttcgccggcacctggcccacccgc
gaggaatctgccgagtccggggcgcattcaatcctcgttttggatcacctcactcgtcga
ggggcgagcttcgtggccgacatggcccgagtgaccggcctgggtcccctggcggtccgg
tcggaactcgaatcgctcttgcgtcgggggatggtcacgaatgaccggttcgacccgctc
aggcccggaggtcaggcgatggccgaggcgctctcggccgcttcgagccggtcgaagccg
ggtcgggcctcgatccgtcggggcgcttcgaggcgtcccgaggggcgctggtcgatcctc
tcggcaagcccatcggacgacccggaaggctcggcactggcctgggcttgggcactgatc
gagcgttacgggatcctggcccgggagacggtggaactcgacccctgggcccctccctgg
cgggacctcgccccctggctagcccgctccgaattgagaggggaactccgccggggatac
ttcgtggagggactctcgggcgtgcagtacacgatccccgaagtcgtcgaggaactggcc
cgatcctcgtcgcggagtgtgtcggaaggggttcccgtcctgctctcgaccctcgatccg
gccaacctctacggggcgggcgctcccctggatattcccctgctggagggtggcaccgcg
agactcgcccggaattcatcgaactttctcgtactgatcacgggccgccccgtcttgatc
atcgagggacatggtcgtcgcctcaccggactggcctctgcttcggaactcgatctgaag
tcagccattgcgctcttgccgaccctggccggtccgacgcgacgagtcctcaaggtcgag
tcgtacaacaccgccgcgaccctctccagtcccgcggttccctggctcaccgaggtcggt
ttcgtccgagacttccccgggatggcgttttacgcgggttggtcttccgagtcgtga
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