Tundrisphaera lichenicola: P12x_005987
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Entry
P12x_005987 CDS
T11482
Name
(GenBank) CDC48 family AAA ATPase
Organism
tlq Tundrisphaera lichenicola
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Ortholog
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GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_14
CDC48_2
AAA_5
AAA_2
AAA_22
NPHP3_N
AAA_33
TIP49
nSTAND3
AAA_28
RNA_helicase
NACHT
TsaE
Mg_chelatase
AAA_17
Zeta_toxin
nSTAND_NTPase5
AAA_3
AAA_18
ABC_tran
Viral_helicase1
Sigma54_activat
NB-ARC
IstB_IS21
AAA_7
ATPase
DUF815
Parvo_NS1
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
XXJ15028
LinkDB
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Position
pP12_1:82106..84277
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AA seq
723 aa
AA seq
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MATADEVATHLKLKVSEAMPKDLGRGLARLDPADMARLGLEVGDVVEVVGKRSTVAKAMP
AYKEHRGQSRVQVDGVTRENAGAAIDGSVEVRKAQAHPARRVVLAPTSITPAERDLKYIG
GLLDGLPVVTGDRVRATLFGNKPADFKVTATTPPGPVVINPTTELEIGRGSAKGSPAKET
SDGPRPLSYEEIGGLKRELHRIREIIELPLRYPEVFERLGISPPKGVLLHGPPGCGKTLI
ARAVAHETDAKFFTINGPEIIHKFYGESEAHLRKIFEEAAKQAPSIIFLDEIDAIAPQRD
KVVGDVEKRVVAQLLALMDGLSRRKGVIVLAATNLPNALDPALRRPGRFDREIAISIPDR
DGRKEILEIHSRGMPLAPDVDVTHLAAITHGFVGADLEALCREAAMLCLRRLLPAIDFGS
GQIPYETLRALEVRMDDFEGALLEVEPSAIREVFVEIPNVGWDDVGGLEQAKRELIESVE
WPLKHPEAFAAAGVKPPRGILLSGAPGCGKTLLAKAVASQTQVNFISVKGPSLLSKYVGE
SERGVRDIFRKAKQAAPCIIFFDEIDALVPARGSGGSDSGVTERVIGQFLAEMDGVEDMN
GVLVLGATNRPDILDPALLRPGRFDIQLEIPLPNLSGRGEIFRIALREKPAAGDISIDDL
ASRSEGFTGAEIQGLCTTAARSALRAALEQSGGDPETMPPICITRAQLDVALDEVKGLSH
RPA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcggacgaagtcgcaacacatctcaaattaaaggtctccgaggcgatgccc
aaggatctgggccgaggcctcgcccggctcgatccggccgacatggcccggctcggcctg
gaagtcggcgacgtggtcgaggtcgtcggcaagcggtcgaccgtcgccaaggcaatgccc
gcctataaggaacaccggggccaatcgagggtccaggtcgacggcgtcacccgcgagaat
gccggggccgcgatcgacggctcggtcgaggtccgcaaggcccaggcccacccggccagg
agggtcgtcctggcccccacctcgatcaccccggccgagcgcgacctgaagtacatcggg
gggctgctcgatggcctgcccgtggtgaccggcgaccgggtcagggccaccctcttcggc
aacaaacccgccgacttcaaggtgaccgcgaccaccccccccggcccggtcgtgatcaac
ccgacgaccgagctggaaatcggccgaggctccgccaagggatccccggccaaggaaact
tcggacggccctcggccgctctcctacgaggaaatcggcggcctgaaacgcgaactgcac
cggattcgcgagatcatcgagctaccgctccgctatcccgaagtcttcgagcggctgggg
atcagcccacccaagggagtcctgctgcacgggccgcccggctgcggcaagaccctgatc
gctcgggcggtggcccatgagaccgacgccaagttcttcacgatcaacggcccggagatc
atccacaagttctacggcgagagcgaggcccacctccggaagatcttcgaggaggcggcc
aagcaggcccccagcatcatcttccttgacgagatcgacgccatcgcgccccagcgtgac
aaggtggtcggagatgtcgagaagcgggtcgtggcgcagctcctggccctgatggatggc
ctgagtcgtcggaagggcgtgatcgtcctggccgcgaccaacctgcccaacgccctcgat
ccggcgttgcgtcgccccggccgattcgatcgcgagatcgccatctcgatccccgatcgg
gacggccgaaaggagatcctcgagatccacagtcgagggatgccgctggccccggatgtc
gacgtcacccatctggccgcgatcacccacgggttcgtcggggccgacctggaagccctc
tgccgggaagcggcgatgctctgcctccgacgcctcctgccggccatcgacttcggctcg
ggccagatcccctatgaaacactccgggcgctcgaggtccgaatggacgacttcgagggg
gcactcctggaggtcgagccatcggcgatccgcgaggtcttcgtcgagatcccgaacgtt
ggctgggacgacgtggggggtttggagcaggccaagcgcgagctgatcgagtcggtcgag
tggcccttgaaacatcccgaggccttcgccgccgcgggggtgaagccgcctcgcgggatc
ctcctctcgggggccccgggttgcggcaagactctcctggccaaggcggtcgccagtcag
acccaggtcaacttcatctcggtgaagggaccgtcgttgttgtcgaaatatgtcggagag
tccgagcgaggggtccgcgatatcttccggaaggccaaacaggccgccccttgtatcatc
ttcttcgacgagatcgacgcgctggtccccgcccggggttcgggagggtcggactcgggg
gtgaccgagcgggtcatcggccagttcctcgccgagatggacggcgtggaggacatgaac
ggcgtgctcgtcctgggcgcgaccaatcgccccgatatcctcgacccggcgttgctcagg
cccggccggttcgatatccagctcgagattcccctgcccaatctgagcggacggggtgaa
atcttccggatcgccctgcgcgagaagccggcggccggagacatctcgatcgacgacctg
gcgagccgttccgaagggttcaccggggccgagatccagggcctctgcacgacggcggcc
cgctccgcgctccgagcggccctggagcagtccgggggcgatcccgaaacgatgcccccc
atctgcatcacccgggctcaactggatgttgcccttgacgaggtcaaaggcctttcccac
cgcccagcttga
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