Thiorhodovibrio litoralis: Thiosp_00029
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Entry
Thiosp_00029 CDS
T09560
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiosp_00029 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlr03019
]
Thiosp_00029 (rppH)
Messenger RNA biogenesis [BR:
tlr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Thiosp_00029 (rppH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WPL10317
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All DBs
Position
33427..34047
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AA seq
206 aa
AA seq
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MIDRDGFRPNVGIILCNAERRLFWGRRVGQNAWQFPQGGIQGDETPREAMFRELEEEVGL
VPRQVTILGSTRGWLRYRLPKRFIRRHCCGPTCIGQKQVWFMLRVDCGEDAFCLDHSPKP
EFDAWRWVRYWSPLREVVYFKRQVYEQALIELQPLLYPELREDRPSRSPDGLTRDSQPMS
AQPLSLDWAAAEPVGPVQPRAAYRRR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatcgcgacggcttcagacccaatgtcggcatcatcttgtgcaacgccgagcgg
cgcttgttctgggggcgtcgtgttgggcagaacgcatggcagtttccgcagggtggcatc
caaggcgatgaaaccccgcgggaggcgatgtttcgcgaactcgaggaggaagtcggtctg
gttccgcgccaggtgaccatcctcggcagcacgcgcggctggctgcgctaccgcttgcca
aagcgctttatccgcaggcactgctgcgggccgacttgcatcgggcaaaagcaggtctgg
tttatgctgcgggttgactgcggcgaggatgccttttgtctcgaccactcccccaagccg
gagttcgacgcctggcgctgggtgcgttactggagcccactgcgtgaggtggtctacttc
aagcgtcaggtttacgagcaggcgctgattgagttgcagcccctgctctatccagaactg
cgcgaggatcgcccatcacgctcgcccgatgggctgacgcgcgattcccagcccatgtcg
gcgcaaccgctgtcgctcgactgggcggcggcggagccggtggggccggtgcagccacga
gcggcctaccggcgccgttag
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