Thiorhodovibrio litoralis: Thiosp_00219
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Entry
Thiosp_00219 CDS
T09560
Symbol
spoVD
Name
(GenBank) Sporulation-specific penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr00550
Peptidoglycan biosynthesis
tlr01100
Metabolic pathways
tlr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Thiosp_00219 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Thiosp_00219 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlr01011
]
Thiosp_00219 (spoVD)
Enzymes [BR:
tlr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Thiosp_00219 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Thiosp_00219 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WPL10504
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All DBs
Position
220112..222007
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AA seq
631 aa
AA seq
DB search
MFKDPRGEKRLFTARVILAAVVVVLCLAAVVARLVFLQVYNNDHFRTLSEDNRVRVEPLP
PMRGLMYDRNGVLLADNVPSYSLEIIPGRVEDVAATIDALSKIIPISEDDRQRFERLRRQ
HRRFDGVPIRLDLSDAERARFAVQSHRFPGVQIHAELLRHYPFSLETAHVLGYVGRINEE
EMGRIDTSAYAGTSHIGKVGLEKAYEDALHGIVGYQQVEVNARGRVLRTLKEQLPTSGED
LVLFLDLDLQRDAMAAMEGKRGAVVAIDPTSGGVLAMASTPSFDANLFVDGISVKDYVAL
RDSIDKPLYNRAVRGQYPPASTIKPFIGLGGLATGSISFSDGKYCGGYFQLPGHGHRYRC
WRRSGHGTLTVTDAVVQSCDVYFYRLAHDMGIERLDRFLGDFGFGTTTGMDFADELGGLL
PSPEWKERVRGQPWYPGETLIVGIGQGAFLVTPVQLAAATAAMANHGTYFQPRMVQAVRD
PASGIVQRTTAVSHRVAVDSEAKWQGIVDAMAQVVEGPRGTARRIRSPLIRIAGKTGTAQ
VFTIGQNERYNESQVAERMRDHALFIAFAPVEAPQIAVAVIVENGRHGSSTAAPIARQLI
DSYLLKKRVKIPEPADTAPNAQADADGSDVD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagatccacgcggcgaaaagcggctgttcaccgcgcgggtgattctagccgcc
gtcgtggtggtgctctgcctggctgccgtggtggcgcgcctggttttcctccaagtttat
aacaacgaccattttcgcaccttgtctgaggacaatcgtgtgcgcgtagagcccttgccg
cccatgcggggcctgatgtacgaccgcaatggtgtgctgctggccgataatgtgccgtcc
tactcgctagagatcatcccaggccgggttgaggatgtcgccgccaccatcgatgcactg
agcaaaatcatcccgatcagcgaggacgaccgtcagcgcttcgagcgcttgcgccgccag
catcggcgcttcgacggggtgccgatccgcctggacttgagcgacgccgagcgcgcccgt
ttcgcggtgcagagtcatcgcttccccggtgtgcagattcatgccgagttgctgcgccat
taccccttctcgctcgagacggcccatgtactcggttatgtcgggcgcatcaacgaggag
gaaatgggccggatcgatacctcggcctatgccggaaccagccatatcggcaaggtcggc
ctggagaaggcctatgaggacgctttgcacggcatcgttggttaccagcaggtggaggtc
aatgcgcgtgggcgggtactgcgcacgctcaaagaacagctgccaacctcaggtgaagat
ctggtgctgtttctcgatctcgacctgcagcgcgatgcgatggcggctatggagggaaag
cgcggggccgtggtggccatcgacccgacctccggcggcgtgctggcgatggcgagcacc
cccagcttcgacgcaaacctgtttgtcgatggcatcagcgtgaaggattatgtcgctctg
cgtgactcgatcgacaagcctttgtacaaccgagcggtgcgcggtcagtatcccccggcc
tcgaccatcaaaccgttcatcggccttggcggcctggccaccggctccatcagtttcagc
gacggcaaatactgcgggggctattttcagctccccggccacggccatcgttatcgctgc
tggcggcgcagcgggcatggcaccttgaccgtgaccgatgccgtggtgcagtcttgcgat
gtgtatttttaccggctcgcgcacgacatgggcatcgagcggctcgatcgattcttgggc
gatttcggctttggcaccacaacgggcatggacttcgccgatgagcttggcggtctgctg
ccgtcgccagagtggaaggagcgtgtccgtggtcaaccctggtacccgggtgagacgctg
attgtgggcatcgggcagggcgcttttctggtgactccggtgcagctggccgctgcgacc
gcggccatggctaaccacggaacctacttccagccgcgcatggtgcaggcggtgcgcgat
ccggccagtggaattgtgcaaagaacaacagcagtgagccatcgcgttgcggtcgacagc
gaggcgaagtggcaggggattgtcgatgcgatggcgcaggtggtggaggggcctcgtggt
accgcacgccgcatccgcagcccattgatccgcattgccggcaagactggtaccgcgcag
gtcttcaccatcggtcagaatgagcgttacaacgagtcacaggtggccgagcgcatgcgc
gaccatgcgctgttcatcgctttcgcgccggtcgaggcgccgcagatcgcggtggccgtg
atcgtcgaaaacggccgccatggcagctcgactgccgcgcccattgcccgccagctcatc
gatagctatctcctcaaaaaacgcgtaaagattccggagccggcggacactgcgcccaac
gctcaggcggatgcagacggatcggatgtggattga
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