Thiorhodovibrio litoralis: Thiosp_00455
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Entry
Thiosp_00455 CDS
T09560
Name
(GenBank) conjugal transfer ATPase TrbE
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_00455
DNA repair and recombination proteins [BR:
tlr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Thiosp_00455
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
ResIII
FtsK_SpoIIIE
AAA
AAA_30
AAA_16
TrwB_AAD_bind
CbiA
T2SSE
AAA_7
Hydrolase
AAA_28
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WPL10737
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All DBs
Position
complement(492656..494155)
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AA seq
499 aa
AA seq
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MTDPLLIGKGEQSLWLRSDKANRHGLIAGATGTGKTVTLQLLAEQFSRIGVPVFMADVKG
DLAGISQPGGENAKVAERVQELDLESLGFRYDKNPVSFWDIGGALGHPARTTVSEMGPML
LARLLGLNDTQEGVLNICFHIADENGLLLLDLKDLRAILNFASEQADALRTTVGHVSQAS
VGAILRRLLRLEQAGGETLFGEPALDLSDLMQTDIDGRGVVNILAAESLIQNRTLYASFL
LWLLSELFEQLPEVGDPDKPKFVLFFDEAHLLFDDAPEVLIERIEQVVRLIRSKGVGVYF
VTQNPLDIPDTVLGQLGNRVQHALRAFTPRDQKAVRAAAQTFRQNPAIDTETAITALGVG
EALVSVLDEDGIPTPVERVLIAPPGSRLGPISADERAALIRQSLVSGVYEQAIDRVSAYE
TLKTMAEQAAKAAEQRQDAPSTSGRTSAGQRSSGKRRSSSRQTPMEAMLKSTLRSVGSQL
GRQLVRGALGSLFGGSRRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccattgttgatcggcaagggcgagcaaagcctctggctgcgctcggacaaa
gccaaccgccatggcttgattgccggggccaccggcaccggcaagaccgtcaccctgcaa
ctgctcgccgaacaattcagccgcatcggcgtgcctgtgttcatggccgacgtgaagggc
gacctggccggcatcagccagcccggcggcgagaatgccaaggtcgccgagcgggttcaa
gaattagacctcgagtcactgggctttcgctacgacaagaacccagtcagtttctgggac
atcggcggcgcgctcggccatccggcccgcaccaccgtcagcgaaatgggccccatgctg
ctcgcgcgcctgctggggctgaacgacacccaggaaggggtgctgaacatttgctttcat
attgccgacgagaatggcctgctgctacttgacctcaaagacctgcgcgccatcctcaat
ttcgcctccgagcaggccgacgcgctgcgcaccacggtcgggcatgtgtcccaggcatca
gtcggcgccattctgcgccggctgctgcgactcgagcaggccggcggcgagacgctcttc
ggcgagccagcactggatctgtccgacctgatgcagaccgacatcgacggacgcggggtg
gtgaacatcctggccgccgaatccctcatccagaaccgcacgctctatgccagcttcctg
ctgtggctgctctcggagttgttcgagcaactacccgaagtcggcgatccggacaagccc
aagttcgtgctctttttcgacgaggcgcacttgttgttcgacgacgcgcccgaggtgctg
atcgagcgcatcgagcaagtggtgcggctgatccgctccaaaggcgtcggggtctatttt
gtcacccaaaacccgctggacatccctgacacagtgcttggccagctcggcaaccgggtg
cagcacgcgctgcgcgccttcacccccagagatcaaaaagccgtgcgcgcggcggcccag
accttccgccaaaatccggccatcgacaccgaaaccgccatcaccgcgctcggcgttggc
gaggcgctggtctcggtgctcgatgaggacggcattcccaccccggtcgaacgcgtgctg
atcgccccacccggcagccggcttggccccatcagcgctgatgagcgcgccgcattgata
cgccagtcgctggtcagtggtgtctacgaacaggccatcgaccgcgtctccgcctatgaa
accctcaagaccatggccgagcaggccgcgaaagcggctgagcagcgccaggacgcgccc
tcgacgtccgggcgcacctccgccggccagcgcagcagcggcaagcgccgctccagcagc
cgccaaacacccatggaagccatgctgaaaagcaccctgcgttcagtcggcagccagctc
ggccgccaactggtgcgcggcgccctgggctcgctcttcggcggcagtcgccggcggtga
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