KEGG   Thiorhodovibrio litoralis: Thiosp_00851
Entry
Thiosp_00851      CDS       T09560                                 
Symbol
hsdR_1
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tlr  Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:tlr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlr02048]
    Thiosp_00851 (hsdR_1)
Enzymes [BR:tlr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Thiosp_00851 (hsdR_1)
Prokaryotic defense system [BR:tlr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Thiosp_00851 (hsdR_1)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 Helicase_C AAA_11 AAA_34 SNF2-rel_dom HHH_6 AAA_16 IspD AAA_19
Other DBs
NCBI-ProteinID: WPL11123
LinkDB
Position
935879..938353
AA seq 824 aa
MNKKSLSEDDICVKFITPAIVNAGWDESTQIRRQVSFTKGRIIVRGKLVTRGKAKRADFI
LYYRGIPIAIIEAKDNNHSVGAGMQQALDYALTLDVPFVFASNGDAFVFHDRTGQSAQLE
TALALDAFPAPDALWARYRAWKNLAPAQEAIVLQPYFHDGSGKEPRYYQRNAINAAIEAI
AKGRDRILLVMATGTGKTYTAFQIIWRLWKAGRKKRILFLADRNVLIDQTMVNDFRPFGP
AMAKLSTKAKTIERADGTSTELTLALDKQRRIDTAYEIYLGLYQAITGPEERQKLFREFS
PGFFDLIVIDECHRGSAAEDSAWREILDHFAAATQIGLTATPKETEYVSNIHYFGKPVFS
YSLKQGIRDGFLAPYKVIKVHLDVDVEGYRPTTGETDSKGELIEDRHYNQKDFDRTLVID
ARTRRIAKWVSDYLKQSGDRFQKTIIFCVDTDHAARMRQALINENQDLTQQNPRYVMRIT
GDDPDGQAQLDNFIDPESRYPVLVTTSRLLSTGVDAQTCRLIVLEREVGSMTEFKQIVGR
GTRVHEDTKKYYFTLVDFRKATNHFADPDFDGEPVQIYEPGEDDPPIPPEDEMPVDQGED
AIPPQPGEDEIVIDQPEPPDISLPPGTLPPGVGEPRPKYYIKGRPVTVLTERVEYLDENG
KLVTESLRDYSRRAIRGHFASLEQFLRRWRSTERKEAIIEELAEEGLLLEPLLEEVGKEL
DPFDLICHIAFDQPPLTRRERANKVAKGDVFTKYGPQARAVLEALLDKYQDEGLVGGLDN
VRVLAVPPFDKMGTPLQLIKEFGTKAGFEQAVHELQAALYEDVA
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgaacaagaagtcgctgagcgaagacgacatctgcgtcaagttcatcacgccagccatt
gtcaacgccggttgggacgagagcacccagatccgccgccaggtctccttcaccaaaggc
cgcatcatcgtgcgcggcaagctggtgacccgcggcaaggccaagcgcgccgacttcatc
ctctattaccgcggcatcccgatcgcgatcatcgaggccaaggacaacaaccacagcgtc
ggcgctggcatgcagcaggccctcgactacgctctgacgctggacgttcccttcgtcttc
gccagcaacggcgacgccttcgtcttccatgaccgcactggccagagcgcccaacttgag
accgccctcgcgctggacgccttccccgcgcccgatgccctctgggcgcgctaccgcgcc
tggaagaacctcgcgcccgcccaggaagccatcgtcctgcaaccctatttccacgacggc
agcggcaaggagccgcgctactaccagcgcaacgccatcaacgccgcgatcgaggccatc
gccaaggggcgggaccgcatcctgctggtcatggccaccggtaccggcaagacctacacc
gccttccagatcatctggcggctgtggaaggctgggcgtaagaaacgcatcctgttcctc
gccgaccgcaacgtcctgatcgaccaaaccatggtcaacgacttccgccccttcggtccg
gccatggccaagctcagcaccaaagccaagaccatcgagcgcgccgacggcaccagcacc
gaactgaccctggcgctggacaaacagcgacggatcgacaccgcctacgagatttacctc
ggtttgtaccaagccattaccggtcccgaggagcgccagaagctctttcgcgagttctcc
cccggctttttcgatctgatcgtcatcgacgagtgccaccgcggtagcgccgccgaggat
tccgcctggcgcgagatcctcgaccacttcgccgccgccacccagatcgggctaaccgcc
acacccaaggaaaccgaatacgtctccaacattcactacttcggcaagccggtcttctcc
tactcactcaagcagggcattcgcgacggctttctcgccccctacaaggtcatcaaggtg
cacctggacgtcgacgtggagggctaccgccccacaaccggcgagaccgacagcaagggc
gagctgatcgaggaccgccactacaaccagaaagacttcgaccggaccttggtcatcgac
gctcgcacccggcgcatcgccaagtgggtctcggactacctcaaacagagcggcgaccgc
ttccagaagaccattatcttctgcgtcgacaccgaccatgctgcccgcatgcgccaggcc
ctgatcaacgaaaaccaggatctcacccagcagaatcccaggtacgtcatgcgcatcact
ggggatgatccggacggtcaggctcagctcgacaacttcatcgaccccgagtccaggtac
ccggtgctggtcaccacctcacgcctgctctcgaccggagtggatgcccagacctgccgc
ctgatcgtgctggagcgcgaggtcggctccatgactgagttcaagcagatcgtcgggcgc
ggcacccgggtccacgaggacaccaagaagtactatttcaccctggtcgacttccgtaag
gcgactaaccacttcgccgaccctgacttcgacggcgagccggtgcagatttacgagccc
ggcgaggatgatcccccgatcccgcccgaggacgagatgccggtcgatcaaggggaggac
gccatcccgccgcaaccgggcgaggatgagatcgtcatcgaccagccggagccgcccgac
atcagcctgccgcccggaaccttgccgcccggcgtcggtgagccgcgacccaagtactac
atcaagggccggccagtcaccgtgctgaccgagcgggtcgagtacctggacgagaacggc
aagctggtcactgagagcctgcgcgactactcccgccgcgccatccgcggccatttcgcg
agcctcgagcagtttctgcgtcgttggcgctccaccgagcgcaaggaggccatcatcgag
gagctggccgaggaagggctgctgctcgagcccctgctggaagaagtcggcaaggagctc
gaccccttcgacctgatctgccacatcgccttcgaccagccgccgctcacccgtcgcgag
cgtgccaacaaggtcgccaagggtgacgtattcaccaagtacggcccccaagcccgcgcc
gtgctggaggccctgctcgataagtaccaggacgagggcctggtcggcggactcgataac
gtccgcgtcctggcggtcccacccttcgataaaatgggcaccccgctacaactcatcaaa
gagtttggcaccaaggccggctttgagcaggccgtgcatgagctgcaagccgccctctat
gaggacgttgcatga

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