Thiorhodovibrio litoralis: Thiosp_00884
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Entry
Thiosp_00884 CDS
T09560
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlr03016
]
Thiosp_00884 (truB)
Enzymes [BR:
tlr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Thiosp_00884 (truB)
Transfer RNA biogenesis [BR:
tlr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thiosp_00884 (truB)
Prokaryotic type
Thiosp_00884 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WPL11156
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All DBs
Position
974237..975232
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AA seq
331 aa
AA seq
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MARRRKQGRKVAGILLLDKPFGQTSNHALQRVKHLYQAAKAGHTGSLDPLATGLLPICLG
HTTKFSGFLLDADKRYRVRVRLGETTTTADAEGEILERKPTDGVTEAAVRACLEPFLGDI
QQLPPMYSAVKHQGERLYKLAREGKEVERQPRAIRIHRLELLDVALPDIELDVHCSKGTY
VRTLAEDIGHCLGCGGHVIGLRRTGVGPYVEGETRFVTMDELQNLAGSRDGEQDNQAASS
ATDADAAAEAPSFRERLQALDALLLSLDTTLGHCPALRLSADAAFYLAQGQPVLVPQAPT
DGMVRLYDQSDQFLGVGSILEDGRVQPKRLV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacgacgtaaacagggccgcaaggtggcaggaattctcctgctcgataagcct
ttcgggcagacatccaaccacgccctgcaacgggtcaagcacctgtatcaggccgccaag
gccgggcataccggcagccttgatccgcttgccaccggcctgctgcccatttgtcttggc
cataccaccaagttttcaggctttctgcttgatgccgataagcgctaccgggtgcgcgtg
cgcctgggcgagaccaccaccacggccgacgccgagggtgagattctcgagcgcaagccg
accgacggggtgacggaagcggctgtgcgcgcctgtctggagccttttctcggcgatatt
cagcaactgccgcccatgtactcagccgtcaagcatcagggcgagcgcctctacaagctg
gcgcgcgagggcaaagaggtcgaacgccagccgcgggccatccgcattcatcgcttagag
cttctcgatgtggcgctgccggatatcgagcttgatgtgcattgctccaagggaacctat
gtgcgcactctggcagaggatatcggccattgtctcggctgcggcgggcatgtcatcggc
ctgcgccgcacgggggtcggaccctatgtcgaaggcgaaacccgcttcgttaccatggat
gagctgcagaatctggctggcagtcgcgatggcgagcaagacaaccaagccgcaagcagc
gcaaccgacgccgacgccgcggctgaagccccgtcgtttcgcgagcgtctacaggcactc
gacgccctgctgctgtcactcgacaccacgctcgggcattgtccggcgttgcgcttgtcc
gctgacgcggccttttatctggcccaagggcagcctgtgctggtaccacaggcgccaacc
gacggcatggtgcgcctctatgatcagtccgaccagtttctgggagtgggcagtatcctt
gaggatggccgggtacagccaaagcgtctggtataa
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