Thiorhodovibrio litoralis: Thiosp_00954
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Entry
Thiosp_00954 CDS
T09560
Symbol
algE1
Name
(GenBank) Poly(beta-D-mannuronate) C5 epimerase 1
Organism
tlr
Thiorhodovibrio litoralis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
HemolysinCabind
Big_6
bMG3
DUF3060
Motif
Other DBs
NCBI-ProteinID:
WPL11224
LinkDB
All DBs
Position
complement(1056625..1060065)
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AA seq
1146 aa
AA seq
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MVDISVNWARIYFGNSDPYAEVNWDATKQVIITRDSGSTNFLGTWTDTNSGPKADETLRS
VVGYAHSYTNRSLRVNWADGSGALDIEGSDVSDTMEGGSGEDTLSGFGGDDTLDGGAGDD
SLTGGTGDDSLTGGTGDDSLTGGAGADTFVHNGAGDGLDTITDFNAAEDTLDIPSLNGWR
WDGAAKTLTLNGEGFKFEGNTGLEDQAFKFTVRDGGLLWSNQTAAGWNDGTAHADLGVIY
DRELIGFYAGDGNDALYDASSGGHNFYGQNGDDFLSGGSGENNIIGGAGNDTLTGGSGAD
RFWDTADGLAGDTITDFQADDTLTIQGEDLTSLNGTPAGDIDLGSGRTLHMTGVAGKAWS
AIRAGSNTNITFDTTAPTLQSFARQSPTEPTTSADTLVFRATFDEGVTNVTADDFTIDGT
TTATITHVSQGTDASVWDITVSGGDLAGLIGTVGLDLAAGQDITDIGGNALPGGEPVTDE
TYTLDNIPPAVPSMPDLDAASDTGLAHDDDHTNDTTPTLTGTAVAGVAVTLYSSIDRIVG
TTTADEAGNWSITASALADGTHTFTATATDAVGNESAASAGLDVVVDGSGPVFTSSDAPS
VVENTTDILTLSATDATGPVTFAITGGADQVLFTLDETTAALSFAAGQPYAHGGDNDREL
QVTATDAFDQTTVQTITVTIVDTPNALPAFSSLDGTPTFTEGGTAVILDGDVTVSDTELD
ARNAGASNYAGASLTIARSGGAIADDTFSIESGGSLTVAGSTISAGGNAIADFDTTTTAG
QVTVSFKDVNGTTPTTALVNEVMQAIQYKNTSDDPPASVDLDWTFKDGNTGPGDQGSGDA
PGTGSGAVTVTISTVNQAPTLSATGDNPTFTEGGGGASLFSSANANAGEPGDSFAGLTLT
VSNVTDGAAEILSIDGTDVALTDANSVTVAGGTAAVSLSGSTATVTVTGLDRTQVQFEAL
VNGLAYRNTSDDPTAASDRVVTITAVQDDGGKANGGADSTTTAIASTVTLTAVNDPPEVG
SVFGETATLVAGAGAQNVALLDDATVSNPDSADYEGGSLTVTQDSGGANGSWGLDGTTAT
SGGEGTIAAGETIAVDGVSIGTVHATDDGQGGNTLQVSFTAGATSANIQTLLQALTYDAP
ALGGGG
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggttgatatttcggttaattgggcacgcatttattttggaaactccgacccctatgcg
gaggtaaactgggatgcaacgaagcaggtcatcatcacccgcgatagcgggagcacaaac
tttctgggcacctggaccgacacaaacagcgggcctaaagccgatgaaacgttgaggtct
gtcgttggttatgcgcactcatacacgaatagaagtcttagggtgaattgggccgatggg
tcgggcgcgctggatatcgaaggtagcgatgtctctgatacgatggagggcgggtccgga
gaagacaccctatccggatttggcggcgatgacaccctggacggcggggccggcgatgac
tccctgaccggtggaaccggcgatgactccctgaccggtggaaccggcgatgactccctg
accggcggcgccggcgccgacaccttcgtccacaacggggcgggtgacggcctggacacc
atcaccgacttcaatgccgccgaggacacgctcgatattccctccctgaacggctggcgc
tgggacggcgcggcaaaaacgctgacgctgaatggcgaagggttcaagttcgagggcaac
acgggcctggaggatcaggccttcaaattcacggtccgcgacggcggcttgttgtggtca
aaccagacagcggccgggtggaacgacgggaccgcacacgccgacctgggtgttatttat
gatagggagcttatcggtttttacgcgggcgatggcaacgacgctctttacgatgcctcc
agcggtggacacaatttttacggccaaaacggcgacgattttctctccggcgggtccggt
gagaacaacattatcggcggcgccggcaacgacacgctgactggcgggtccggcgccgac
cgattctgggacacggccgacggccttgccggcgacaccatcacggatttccaggccgat
gataccctgacaatccagggcgaggacctgacgtccctgaacggcacgcccgccggcgac
atcgacctgggtagcggccgcacccttcacatgaccggcgtcgcgggcaaagcgtggagc
gccattagagccgggtccaacaccaatatcaccttcgacaccacggcccccacgctgcaa
tccttcgcccgccagagcccgaccgagccgaccaccagcgccgataccctggtgttccgc
gccacgttcgatgaaggcgtgaccaatgtcaccgccgacgacttcacgattgacggcacc
accaccgccaccatcacgcacgtcagccagggcacggacgccagcgtgtgggacatcacc
gtctctggcggtgacctggctgggctaatcggcacggtcgggctggatctggcggccggt
caggacatcaccgacatcgggggcaacgccctgccgggtggtgagccggtcacggatgag
acctacactctcgacaacataccgccggccgtgccctcgatgcccgatctggacgccgcc
agcgacaccggcttggcccatgacgacgaccacaccaacgacaccacgccgaccctgacc
ggcaccgccgtggcgggggttgccgtcacgctctatagcagcatcgaccgcatcgttggc
acaacgaccgccgacgaggccgggaattggtcgatcaccgccagtgcccttgcagacggc
acgcacaccttcaccgcaacggccacggacgcggtggggaacgaatctgcggcgtcggcc
ggtctggacgttgtggtggacggctccgggccggttttcacgtccagcgacgcgccctcg
gtcgtcgagaacacgaccgacattctcactctcagcgccaccgatgccaccggtcccgtc
acctttgccatcaccggcggcgcggatcaggtgctatttacgctggacgagaccacggcg
gccctgtccttcgccgccggccagccctacgcgcacggcggcgacaatgaccgggagttg
caggtcaccgccaccgacgccttcgaccagaccacggtccagaccatcacggtcaccatt
gttgatacgccgaacgcgctgcccgctttctccagcctagacggcacgccgacgttcacc
gagggcgggaccgccgtcattctggacggcgacgtcaccgtcagcgacacggaactggat
gcccgcaatgccggcgctagcaactacgcgggcgccagcctgaccatcgcacgcagcggc
ggcgccatcgccgacgacaccttttcgattgagagtggcggcagcctgaccgtcgccggc
agcaccatcagcgcgggcggcaatgccatcgcggatttcgacaccacgacgaccgccggg
caggtcacggtttccttcaaggacgtcaacggcaccacgcccaccacggcgctggtcaac
gaggtcatgcaggcgatccagtacaaaaacaccagcgacgatccgccggccagcgtggac
ctggactggacgttcaaggacggcaacacgggccccggcgaccagggctcgggcgacgca
ccgggcaccggaagcggggccgtgacggtgacgatctccaccgtcaaccaggcccccacc
ctgagcgcgaccggcgataaccccacctttaccgaaggcgggggcggcgccagcctgttc
agcagcgccaacgcgaatgcgggggagcccggggacagcttcgccggactgaccctgacg
gtcagtaacgtcaccgacggcgccgccgagatcctgtccatcgacggcaccgacgtggcc
ctgaccgacgccaacagcgtgaccgtggccggcggcacggcggcggtcagcctgtcgggc
agcacggcgacggtgacggtgaccggactggaccgcacccaggtccagttcgaggccctg
gttaacggccttgcctaccgcaacaccagcgacgacccgaccgccgcttcggatcgcgtg
gtgaccatcaccgccgttcaggacgacggcggtaaggccaacggcggcgcggattcgacg
accaccgccatcgcctcgaccgtcaccctgacggccgtcaacgacccgccggaggtgggc
agcgtgttcggtgagaccgcgaccctggtcgcgggggccggcgcgcaaaacgtggcgctg
ctcgacgatgccaccgtcagtaacccggactccgccgattacgaagggggcagcctgacc
gtcactcaggacagcggcggcgcgaatgggtcatgggggctggacggcacaaccgcgaca
tcgggcggcgaaggaaccatcgccgctggcgagaccatcgcagtcgacggtgtgtccatt
ggcacggtgcatgccaccgatgacgggcaaggcggcaataccctccaggtttccttcacc
gccggggcgacgtccgcgaacatccagacgctgcttcaggcgctgacctacgacgcgcca
gcactaggggggggcgggtga
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