Thiorhodovibrio litoralis: Thiosp_01219
Help
Entry
Thiosp_01219 CDS
T09560
Name
(GenBank) ATP-dependent helicase HepA
Organism
tlr
Thiorhodovibrio litoralis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD
FlgT_N
Motif
Other DBs
NCBI-ProteinID:
WPL11484
LinkDB
All DBs
Position
complement(1371594..1374935)
Genome browser
AA seq
1113 aa
AA seq
DB search
MIPVDLLNTFQHQFDLGTFERGLRYFRNGRVQSLNIDLERGSLNGRVRGSGNQSYVTLVQ
VSAPRIGTLELSGQCSCPIGHNCKHMVALLLAAEKRLRQGDANGQDEQAVLPSNATAPLP
RELLNWLAGAEQLQHRQTQDDSQCLLFQLDIATAHHRRYLFLKTTKVRRLVDGGFGKREP
FSLLGRSQARFITLTDQRIMALAESVTRQPGGPVHRDRLRIAGPGSADLLQLLASTGRAY
WESSEQPLHWQPPLHGTFRWELQDDATLNIRLDGGPPEALLLPCEPPCWLDPNNGHCGLL
ETDLDPATATLLVQAPAVPSSAAEPLRQRLNDRLPKLKLPLPPTLDRQRVSDLKPVPTLK
LWSENREISRELRHWGMQQYPSWVDGGSLSFRYGKRLIAHDNPQPLVEDVRDGMVVECPR
DQERERQASLELKGLGFSFEYGTHGRLFLSDPDADWLQFVAYDAPRLREKGWDVIIDPSF
RYQLADIDDWEFQIEDEAQDAWFSLALGVEVDGQRVDLLPLLVELMHNFRDSFTSEALAA
TPDDARLPIKLPDGRYAMMPLERVRPLLTTLIELYDDKPLDKDGRLRLAHSQRGQLAELA
NALPDTRWSGAEKTLAWGERLRDFDGIAPVEPPAGLKAELRPYQRKGLDWLQFLRDFELG
GVLADDMGLGKTIQCLAHVLVEKAAGRADRPSLVVAPTSLMFNWRREAERFTPELKVLTL
QGSERHARFSEIPKHDLILTTYPLLPRDYQALGAHPYHMLILDEAQAVKNPRSKAAEAVR
IINARHRLCLTGTPLENHLGELWALIDFLMPGLLGDDRRFKRLFRNPIEKFNDQPRAEQL
RRRIAPFMLRRTKEEVAPELPPKTEILREVPLSGAQRDLYETLRLAMHERVRKEVERKGL
SRSGIVILDALLKLRQVCCDPRLLSLESAKKVKESAKLEMLLELLADLRDEGRRILLFSQ
FASMLDLIEGELKTRQKMRPEQDYVKLTGRTKNRDVLVDRFQSGEVPVFLISLKAGGSGL
NLTAADTVIHYDPWWNPAAERQATDRAHRIGQDKPVFVYKLLTEGTVEQKVAELQARKQA
LADAMLTGGAAATSSLSAADLDMLFAPIAEGEN
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
gtgattcccgtcgacctcctcaacacgtttcagcaccagttcgatctcggaaccttcgag
cgcggtttgcgttattttcgcaatggtcgcgtccagagcctgaacatcgaccttgagcgc
gggtcgctgaacggccgggtgcgaggttccggcaatcagtcctacgtgacgctagtccaa
gtctccgcacccagaatcggcaccctggagctttccgggcaatgctcctgcccgattggc
cacaactgcaagcatatggtcgccctgctgctggcggccgaaaaacgcctgcgccaaggt
gatgccaatggccaggacgaacaagccgtcctgccgagcaacgcgaccgcccccctgccg
cgcgaactgctgaactggctggccggtgcggagcaactgcagcatcgccagactcaggac
gatagccaatgcctgctgtttcaacttgacatcgccaccgcgcatcaccgtcgctatctc
tttctgaaaaccacgaaagttcgtcgcttggtcgacggtggcttcggcaagcgcgaacct
ttctccctgctcggtcgctcccaggcgcgcttcatcaccctgaccgaccagcgcatcatg
gcgctggccgagagcgtcacccgccagcctggcggccccgtccatcgtgaccgcctgcgc
atcgccggtcccggcagcgcagacctgctgcaactccttgccagcaccggccgcgcctat
tgggagtcgagcgaacagccattgcactggcaaccaccactgcatggcacctttcgctgg
gagcttcaggacgacgccacgctcaacatccgcctcgacggcggcccgcccgaggccctg
ctgctcccgtgcgagccgccctgctggctcgatcccaacaacggccactgtggcctgcta
gagaccgacctcgacccggccactgcgaccctgctggtgcaggctcccgccgtgccaagc
agtgccgccgagcccctgcgccagcgcctgaacgaccgtctacccaagctcaagctgcca
ctgccaccgacgctagatcgccagcgggtgagcgatctcaagcccgtgcccacactcaag
ctctggagcgagaaccgcgaaatctcgcgtgagttgcgtcactggggtatgcagcagtat
ccgagctgggtcgacgggggcagcctgagcttccgctatggcaaacgactgattgcgcat
gacaatccccagccattggtcgaggacgtgcgcgacggcatggtggtggagtgcccgcgc
gaccaggagcgcgagcggcaagcaagtctggaattgaaagggctcggctttagtttcgag
tacggcacccatggccgtctctttctgagtgaccctgacgctgactggctgcaattcgtt
gcttacgacgcgcccagactgcgcgagaagggctgggacgtcatcatcgacccgagtttc
cgctaccagctcgccgacatcgacgactgggagttccagatcgaggacgaggcccaggac
gcctggttcagcctcgcgctcggggtggaggtagacggccagcgcgtcgatctgctgccg
ttgctggtcgagctgatgcacaacttccgtgacagcttcaccagcgaggcactggccgcc
acgcccgacgatgccaggctgccgatcaagctccccgacggccgctacgcgatgatgccg
ctcgagcgtgtgcgcccgctgctgaccacgctgatcgagctctacgacgacaagccgctc
gacaaggacggccgcctgcgcctggcgcacagtcaacgcgggcaactggccgagcttgcc
aacgccctgcccgacacgcgctggtccggcgccgaaaaaaccctggcctggggcgaacgg
ctgcgcgatttcgatggcatcgcaccagtcgagccgcctgccggactcaaagccgagctg
cgcccctatcagcgcaagggtctcgactggctgcaatttctgcgcgacttcgagctcggc
ggggtgctggccgacgacatgggtctgggcaagaccatccagtgcctggcccatgtgctg
gtcgagaaagccgccggccgcgccgatcgccccagcctggtggtcgcgccgaccagtctg
atgttcaactggcgccgcgaggccgagcgcttcacgcccgagctcaaggtgctcacactg
cagggctccgaaaggcacgcacgcttctcggagattcccaagcacgacctgatcctgacc
acctacccgctgctgccgcgcgattatcaggcgctcggcgctcacccctatcacatgctc
atcctcgatgaagcccaggcggtcaagaacccgcgcagcaaggcggccgaggcggtgcgc
atcatcaacgcccgccaccggctgtgcctgaccggcacgccactggagaatcacctgggc
gaactctgggcactgatcgactttttaatgcccggcctgctcggcgatgatcgtcgcttc
aagcggctgtttcgcaacccgatcgaaaagttcaacgaccagccgcgcgcggaacaactg
cgccgacgcatcgcccctttcatgctgcgccgcaccaaggaggaagtcgcccccgagctg
ccgcccaagaccgagatcctgcgcgaagtaccgctaagcggtgcccagcgcgatctctac
gagaccctgcgtctggccatgcacgagcgggtgcgcaaggaggtggagcgcaaaggtctg
tcgcgcagcggcattgtgattctcgatgccctgctgaaactgcgccaggtctgctgcgat
ccacggctgttgtcgcttgagagcgcaaaaaaggtcaaggaatcggccaaactcgagatg
ctgctagaactcctggccgatctgcgcgacgagggccggcgcatcctgctcttctcccag
ttcgccagcatgctggatctgatcgaaggcgaactcaaaacccgccaaaaaatgcgcccg
gagcaggactatgtgaagctcaccggccgcaccaagaatcgcgatgtactggtcgatcgc
ttccagtccggcgaggtgccggtgtttctgatcagcctgaaagccggcggcagcggcctc
aacctgaccgctgccgacaccgtcatccactacgacccctggtggaatcccgccgccgag
cgccaggccaccgaccgcgcccatcgcatcggccaggacaagcccgtgttcgtctataaa
ctgctcaccgaaggcactgtggagcaaaaagtcgccgagctacaagcacgcaagcaggcc
ctggccgacgctatgctaaccggcggtgccgccgccacctccagcctgagcgcggccgat
ctcgacatgctgttcgcgcccatcgcagagggcgagaactaa
DBGET
integrated database retrieval system
