Thiorhodovibrio litoralis: Thiosp_01226
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Entry
Thiosp_01226 CDS
T09560
Name
(GenBank) FG-GAP repeat
Organism
tlr
Thiorhodovibrio litoralis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP_3
DUF4347
FG-GAP
Cadherin
Big_5
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
WPL11491
LinkDB
All DBs
Position
1380754..1387377
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AA seq
2207 aa
AA seq
DB search
MNNTIAPRKEVVFLDTTLADWPTLADGVRDGVEVVLIEASHGGLARMAAWAARHSGYDAM
HLLSHGTPGALHLGSDKLVEATLNEADVQTKLKQLGQALSVDGDLLLYGCDLAAGLAGQR
FIQRLSEITDADVAASINRTGQGGDWRLEATVGTITTPALQAADYGGALAPTDGGGSPPP
PLTLEGWTPSANSGDIATDANLTLNFNTSTNLNNSNVLVWGSLSGDIGGYFTYSSINATP
YTATFHQSKDFQPGETVSVSVTSAVGGPKVFQFTVATDADSPGAFSVAGVTIGEINSTNS
VALGDVDGDGDLDVVQGNAGQTQVWLNDGSGGFGTPAGSILGSSSDVTTSVALGDVDGDG
DLDVLRGNAGQTQVWLNDGSGGFGTAAGSILGSSSDVTTSVALGDVDGDGDLDVVQGNDG
QETQVWLNNGIGGFGTAASATLGSYNTRSVALGDVDGDGDLDVVQGNFNEPTQVWLNDGS
GGFGTAASATLGSHATTSVALGDVDGDGDLDVVQGNNGEETRVWMNNGSGGFGTAAGATL
GSYDTRNLALGDVDGDGDLDVVEGNQSQETRVWLNDGSGGFGTAAGATLGSYDTRNVALG
DVDGDGDLDVVQGNYDQETQVWLNQPPTMDADSVTRNDTDITASDNIVLTFPEAIAGGSY
DSDSIKVWGSLTGEVTGSFSASGETLTFDPTTDFKPGETVTVQLTTGVQAASGAALDEGH
SLQFTVATDANSPGAFSAADATLGSHNTRSVALGDVDGDGDLDVVQGNNGQETQVWLNDG
SGGFGAAAGATLGSYNTLSVALGDVDGDGDLDVVQGNYFQETRVWLNNGSGGFGAAAGAT
LVGISRTTSVALGDVDGDGDLDVVQGNDGQETQVWLNNGSGGFGTAASATLGSYNTRSVA
LGDVDGDGDLDVVQGNFNEPTQVWLNNGSGGFGTAASATLGSHATTSVALGDVDGDGDLD
VVQGNNGEETRVWMNNGSGGFGTAASATLGSQATNSVTLGDVDGDGDLDVVQGNFFDPTR
VWLNDGSGGFGTAAGVSIGEINSTNSVALGDVDGDGDLDAVQGNDARPTQVWLNVSTKTI
DTVGNVPATFVTDTGRWADLTNDAAPSGLPRGLKMPLGQFAFQIDGLQDNETANITMLVD
GGNGVAGYFKQNDSGQWVNLATDVTTIGNQTKITFAIQDNGPWDSDSTSGRIVDPGGLGQ
DLLAPKIAENTTYVGDMSDALDLSGLQGAVTYSITDGADQAKFTIDALTGVLRFADGPDY
ETPTDAGSNNIYDVTVTATDSTSGTSSETIPVTVINDTGEDGKIADLQGDNSVFTVNRPQ
YIDAASPDLVSVTSIRNTPEFANGYLLITQIEGTEDGNFSFDTNDATSGNDGQIAAGETI
SVTGFTPNAAAVVNATQDGQNGHALRIEFNDQMTESDVEVLISSLQYTASTQGNRTFSLF
LNDGANAYEAVTFSQVPAPTITSATYNSLTGALVVTGTNFVSLTGDANDIDLSTLTFTGA
GGSSAAFTLTTTSDIEITDATTFTATLSGSDKDAVDALLDANGTQSSDSTTYNLAAADDW
NGPITRGDISDTTGNGITVSGNNSAPTINSDGGGATGAVTVAENSTAVTTVEATDADSGD
TLTYSLSGGADQALFQIDANSGALSFINAPDFENPQDQGDTVGNNTYEVEVKASDGAASD
TQTITVTVTDVNENTGGSAPPSPPPSTPTDNDGDGIDDGEESKVPALPGTDGETVTGDGN
GDGTPDNEQEDVASLPILDTEKVSENPDAPAVYVTLAGGGASSAGAGEGEDPGSESPATP
SVSVTIQSVTQSDAPAPDERDGIDMPLGLIGFEATAEVPDGTEHAGDIPFSLLVEKDPDI
PDEEQINGFWKQDSAGSWVNLASPEYGGQVTEVGGKVRLDFVIEDNGPFDSNPAAGAITD
PGAPGYRAEPLGTTRYLPDSNDRILVDGTYPRILDFGGQDTYTLAEAFIGDVRLVDNQAS
IVNLPEGLIITGARLLADGLELSLPGGTLTLLGAPEAHSYVFGGDPDDPEAGTLLTYTEL
AHVLDTTVPAPGSTEPHQANVSGAVQADGTIAGGPGRIRYLDDGDTSLVIDSGDSLIIDF
GGADSYQLQSELSRDVTLVDNQVSQVYLPEDAAITSARFLTDGLALTIQGHTVTLLGAPE
TFHYILGEEELNYTELAEALGPERADTDALSVEAAFAANIDWEMLPL
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaccatcgcaccccgtaaggaagtcgtctttcttgataccaccctcgccgat
tggccgaccctggcggatggggttcgggacggggtcgaggtggtattgatcgaggccagt
cacggcgggctggcgcgcatggccgcctgggccgcgagacactccggctacgatgcgatg
catctgttgagtcatggcacgcccggcgcgctgcatcttgggtcggacaagctggtcgaa
gcgacgctaaacgaggccgatgtccagaccaagctcaagcaactcggtcaggccttgtcg
gtcgatggcgatctgttgctctatggctgcgatctggccgccggcctggcgggccagcgc
ttcatccaacgtctctcggagatcaccgacgcggatgtcgccgcctccatcaaccgcacc
ggccaaggcggcgactggcgcctggaagccaccgtggggacgatcaccaccccagcgctg
caagcggccgactatggcggcgccttagcgccgaccgacggaggggggtcgccgcccccg
cccctgacattggagggttggacgcccagcgccaactccggcgacatcgccaccgacgcc
aacctaactctaaacttcaatacgagcaccaatctcaataattccaacgtcttagtctgg
ggcagcctgagcggcgacatcggcggctacttcacctacagctcgatcaacgcgactccc
tatacagccaccttccatcagagtaaagacttccagcccggcgagacggtcagcgtttcc
gtcaccagtgccgtcggcgggccgaaggtgtttcaattcaccgtcgccaccgacgccgac
tcccccggcgccttctccgtcgccggcgtcaccataggggagataaattccaccaatagc
gtcgcgctgggcgatgtcgatggcgatggcgaccttgatgtcgtgcaggggaatgcaggc
cagactcaggtgtggctgaacgacggcagcggcggttttggcacccctgccggctccatc
ctggggagtagtagtgacgtaacaacaagcgtcgcgctgggcgatgtcgatggcgatggc
gaccttgatgtcttgcgggggaatgcaggccagactcaggtgtggctgaacgatggcagc
ggcggttttggcaccgctgccggctccatcctggggagtagtagtgacgtaacaacaagc
gtcgcgctgggcgatgtcgatggcgatggcgaccttgatgtcgtgcagggaaatgatggc
caagagacccaggtgtggctgaacaacggcatcggcggttttggcactgccgccagcgcc
accctggggagttacaacacccgcagcgtcgcgctgggcgatgtcgatggcgatggcgac
cttgatgtcgtgcaaggcaatttcaacgaaccgacccaggtgtggctgaacgacggcagc
ggcggttttggcaccgccgccagcgccaccctggggagtcacgccaccaccagcgtcgcg
ctgggcgatgtcgatggcgatggcgaccttgatgtcgtgcaggggaataacggcgaagaa
acccgggtgtggatgaacaacggcagcggcggttttggcaccgccgccggcgccaccctg
gggagttacgacacccgcaacctcgcgctgggcgatgtcgatggcgatggcgaccttgat
gtcgtggaggggaatcaaagccaagaaacccgggtgtggctgaacgacggcagcggcggt
tttggcaccgccgccggcgccaccctggggagttacgacacccgcaacgtcgcgctgggc
gatgtcgatggcgatggcgaccttgatgtcgtgcaggggaattatgaccaagagacccag
gtgtggttgaatcagccacccacgatggacgccgacagcgtcactcgcaacgacaccgat
atcacggccagcgacaacatcgttctcaccttccccgaggccatcgccggtggcagctac
gacagcgacagcatcaaagtgtggggctcgctgaccggcgaagtcacgggcagcttcagc
gccagcggcgagacactgaccttcgaccccaccaccgatttcaagcccggcgagacggtg
actgtgcagctgaccaccggggttcaggcggccagcggcgcagcgctcgacgaagggcac
agcctgcaattcaccgtcgccactgacgccaactcccccggcgccttctccgccgccgac
gccaccctggggagtcacaacacccgcagcgtcgcgctgggcgatgtcgacggcgatggc
gaccttgatgtggtgcaggggaataacggccaagagacccaagtgtggctcaacgacggc
agcggcggttttggcgccgccgccggcgccaccctggggagttacaacaccctcagcgtc
gcgctgggcgatgtcgatggcgatggcgaccttgatgtcgtgcaggggaattacttccaa
gagacccgggtgtggctgaacaacggcagcggcggttttggcgccgccgccggcgccacc
ctggtggggatatctcgcaccaccagcgtcgcgctgggcgatgtcgatggcgatggcgac
cttgatgtcgtgcagggaaatgatggccaagagacccaggtgtggctgaacaacggcagc
ggcggttttggcactgccgccagcgccaccctggggagttacaacacccgcagcgtcgcg
ctgggcgatgtcgatggcgatggcgaccttgatgtcgtgcagggcaatttcaacgaaccg
acccaggtgtggctgaacaacggcagcggcggttttggcaccgccgccagcgccaccctg
gggagtcacgccaccaccagcgtcgcgctgggcgatgtcgatggcgatggcgaccttgat
gtcgtgcaggggaataacggcgaagaaacccgggtgtggatgaacaacggcagcggcggt
tttggcaccgccgccagcgccaccctggggagtcaagccaccaacagcgtcacgctgggt
gatgtcgatggcgatggcgaccttgatgtcgtgcaggggaatttcttcgaccctacccgg
gtgtggctgaacgacggcagcggcggttttggcaccgccgccggcgtctccataggggag
ataaattccaccaatagcgtcgcgctgggcgatgtcgatggcgatggtgacctcgatgcc
gtgcagggcaatgacgcccgaccgacccaggtgtggctgaacgtcagcaccaagacgatc
gataccgtgggcaatgtcccggccacctttgttaccgatacgggccgttgggccgatctg
accaacgacgccgccccgagcggactgccccgcggactgaagatgccgctgggccagttc
gcattccagattgatggccttcaagacaatgaaacggccaacatcacgatgttggtcgac
ggtggcaatggtgtggctggctatttcaaacagaacgatagcggccaatgggtcaatctg
gcaaccgacgtcaccacgatcggaaaccagaccaagatcacctttgcgatccaggacaac
ggcccctgggacagcgattcaacctcggggcgcatcgtcgatcccggcgggctcggacag
gacctgctcgcgcccaagatagccgaaaacaccacctatgtcggcgacatgagcgacgcg
ctcgatctcagtggtttgcagggggcggtcacttacagcatcaccgacggcgctgatcag
gctaaattcaccatcgacgcattgaccggtgtacttcgcttcgcggacggccccgattac
gaaaccccaacggatgctggctccaacaatatctacgatgtgaccgtgacggcaacggac
tcgacgagcggaaccagtagcgaaaccatcccagtcaccgtgatcaacgatactggcgaa
gatggcaagatcgctgatctgcaaggcgacaattcagtcttcacggtgaataggccgcag
tatattgacgccgcaagtccagatttggtgagtgtgacgtcgattcgcaataccccagag
ttcgcgaacggctatctgctgatcacccagatcgaaggcacagaggatggcaatttttcc
ttcgataccaatgatgcaacctcaggcaacgatggccagattgctgcgggtgaaacgatc
tcggtgactggctttaccccaaacgccgcggcagtcgtcaatgccacccaggacggtcaa
aacggtcacgccttgcgcatcgaattcaatgatcagatgacagaaagcgatgttgaagtc
ttgatctcaagccttcaatacactgcctccacccaaggcaaccgcaccttctctctattc
ctgaacgacggcgccaatgcttacgaagccgtcaccttcagccaggttccagcgcccacg
atcaccagcgccacttacaacagcctgaccggcgcattggtggttaccggtaccaacttc
gtcagcctgacgggtgacgccaacgacatcgacctctccacgctcaccttcaccggtgcc
ggcggcagcagcgccgccttcaccctgactaccaccagcgatatcgagatcaccgacgcc
accaccttcaccgccaccttgtcgggcagcgacaaggatgcggtggatgcgttgctcgac
gccaatggcacccagtcgtccgacagcaccacctacaatctagccgccgccgatgattgg
aacggcccgatcacccgcggggacataagtgacaccaccgggaacggcatcacggtttcg
gggaacaacagcgccccgaccatcaacagcgatggcggtggtgccaccggcgcagtcact
gttgccgagaacagcaccgccgtcaccaccgtcgaggccaccgacgccgacagcggcgat
accctgacctacagcctcagtggcggagcggatcaagccctgttccagatcgacgccaac
agcggcgcactgagcttcatcaacgcccccgacttcgagaacccgcaggatcagggcgac
accgtcggaaacaacacctacgaggtcgaagtcaaggccagcgacggtgctgccagcgat
actcagaccatcactgtgaccgtgactgacgtcaatgagaacactggcggcagcgcgcct
ccttcgccccctccatcgaccccgacggataacgacggcgacggcattgatgatggcgaa
gagagcaaagttcctgctttgcctggaacagacggcgagacggtgacaggggacggcaat
ggcgacggcacccctgacaatgagcaggaagatgtcgcgtccttgcccattctggacaca
gaaaaggtctccgagaatcccgatgcgccagcagtctacgtgaccctggctgggggcggc
gcaagttccgcgggcgcaggagagggcgaagacccgggctctgagagcccagcgacaccg
agcgtcagcgtcaccattcaatcggtcactcaatccgacgcgccagcgcccgacgaacgc
gatgggatcgacatgcccttggggctgattggcttcgaagcgacggccgaagtacctgac
ggcacggagcatgcgggcgacattcccttcagcctgctagtcgaaaaagaccccgacatc
cctgatgaggagcaaatcaacgggttctggaaacaagacagcgcaggcagctgggtcaac
ctcgccagccccgagtatggtgggcaagtcaccgaggttggcggcaaggtccggcttgac
tttgtcattgaggacaacggccccttcgacagcaacccggctgccggtgccatcaccgat
cccggtgcgcctggttatcgtgccgagcctcttggtaccacccgctacctgccagacagc
aacgaccgcattttggtcgatggcacctatccgcgcattctcgatttcggcgggcaggat
acctacaccctcgccgaggcctttatcggtgatgtgcggcttgtcgacaaccaggccagc
atcgttaacctgccggagggattgattattaccggcgcgcgcctgttggccgacggactc
gaactcagcctgcctggcggtactctcacgctgcttggcgcgcccgaggcccacagctat
gtcttcggcggcgatccggacgatcccgaggcgggcaccctgcttacttacaccgaactg
gcgcacgtcctcgacaccaccgtcccagcacccggcagcaccgagccgcatcaagccaac
gtcagcggcgcggtgcaggccgacggcaccattgccggcggtcctgggcgcatccgctat
cttgacgacggcgacaccagccttgtcatcgacagcggcgatagcctgattatcgacttc
ggtggcgcggacagctaccaattgcagtcggagctgtcgcgcgatgtcacccttgtcgac
aaccaagtcagccaggtttatctacccgaagacgcggcgatcaccagcgcgcgcttcctc
accgatggactggcgctgacgattcagggccataccgtcaccctgctcggcgcaccggag
accttccactacatcctcggcgaggaggagttgaactacaccgaactggccgaggcgctc
ggccccgagagggctgacacggacgcgctaagcgttgaggccgcgttcgcggccaacatc
gactgggagatgctgccgttgtag
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