Thiorhodovibrio litoralis: Thiosp_01549
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Entry
Thiosp_01549 CDS
T09560
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03420
Nucleotide excision repair
tlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thiosp_01549 (uvrD)
03430 Mismatch repair
Thiosp_01549 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_01549 (uvrD)
Enzymes [BR:
tlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thiosp_01549 (uvrD)
DNA repair and recombination proteins [BR:
tlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thiosp_01549 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Thiosp_01549 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
nSTAND_NTPase5
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WPL11797
LinkDB
All DBs
Position
1736342..1738501
Genome browser
AA seq
719 aa
AA seq
DB search
MDVSRILDPLNPSQREAVSASGSNVLVLAGAGSGKTRVLVHRVAWLLQVEGVQPWSILAV
TFTNKAAREMRARIEEMLEQPVGGMWVGTFHGLAHRFLRAHWQDANLPQQFQILDSDDQF
RLIKRILKMLELDESRWPPRQIQGYINKHKDEGRRSGHIDDGGDYYEQQVIRVYREYEDA
CARGGLLDFADLLLRTHELLRDRPDILHHYRQRFRALLVDEFQDTNAIQYAWLRLLTGDQ
DNLFLVGDDDQSIYGWRGARVENILSFQHQYPNTTVVRLEQNYRSSGNILAAANALIANN
PSRLGKELWTDDSAGDPLRLYSAFNEVDEARFVAERVRRYVAEEGLRRSECAILYRTTAQ
SRLFEEALLQIGLPYRVYGGQKFFERVEIKDALAYLRLLVNPHDDAACERVLNVPARGIG
TRTVEVLRGHAREARTSLWQAAHNALGGSLLSARATGALRQFVELITRMQQDVKDQSLAD
LTLQTIDDSGLPAHYEKAKDGRGIDRLENLEQLVEAARRFEAELEDEDADPLGSFLAHAA
LEAGEGQADGHEDAVQLMTLHSAKGLEFPVVFVTGVEEGLFPHSMSADDPDRLEEERRLC
YVGMTRAMQQLYLTHAESRRLHGREEYPMASRFLRELPAALIEEVRAHGGQRRAGPVLSR
APADGAFQLGEQVLHPKFGTGVVLNSEGTGASARIQVNFEAVGPKWLVLAYARLERASE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcacggattctggacccattaaacccttcccagcgcgaggcggtgtccgcc
agcggcagtaatgtgctggtgctggccggtgctggctcgggcaagacacgggtgctggtg
catcgggtggcctggctgttgcaggtggaaggagtgcagccctggtcgattctggcggtc
accttcaccaacaaggcggcgcgggagatgcgcgcgcgcatcgaggaaatgctcgagcaa
ccggtcggcggcatgtgggtcggcacctttcacggactggcgcatcggtttttgcgcgcg
cactggcaagatgcaaacttgccgcagcagtttcagattctggactccgacgatcaattc
cggctgatcaagcgcatcctcaagatgttggagctggacgagtcccgctggccgccgcga
cagattcagggttacatcaacaagcacaaggatgaggggcggcgctctgggcacatcgat
gacggcggggactactacgagcagcaggtgatccgcgtctatcgcgagtacgaggacgcc
tgcgcccgcggcggtctgctcgactttgccgacctgctgctgcgcacccatgagctgctg
cgcgaccgcccggatattcttcaccactatcgccagcgcttccgagccttgctggtcgat
gagtttcaggacaccaatgccatccaatatgcctggctgcggctactgacaggcgatcag
gacaatctgtttctggtcggcgatgatgatcagtccatctacggctggcgcggggcgcgg
gtggagaacatcctgagcttccagcaccagtatcccaacaccaccgtggtgcgtttggag
cagaattatcgctccagcggcaatatcctggctgccgccaatgcgctcatcgccaacaac
cccagccggctcggcaaggagttgtggaccgacgacagcgccggcgacccgttgcggctg
tattcggccttcaatgaggtcgatgaggcgcgcttcgtcgccgagcgcgtgcgccgctat
gtggccgaggagggcctgcgccggtccgagtgcgccattctctatcgcaccacggcacaa
tcgcgattgttcgaggaagctttgttgcagatcgggctgccctatcgcgtctatggcggg
cagaagttcttcgaacgtgtcgagatcaaggacgcactcgcctatctgcgcttgctcgtt
aacccgcatgacgatgccgcttgcgagcgggtgctgaacgtgccggcgcgtggcatcggc
acccgcacggtcgaggtgctgcgcggccatgccagggaggcgcgtacctccctgtggcag
gcggcgcacaatgccctcggcggcagcctgctgtcggcgcgcgcgaccggggcgctgcgt
cagttcgttgagctgatcacccgcatgcagcaggacgtcaaggatcagtcactcgctgat
ctcaccctgcagacgatcgacgacagcggtctgccggcccattatgagaaggccaaggac
ggtcgcggcatcgaccggctcgagaacctcgagcagctggtcgaagccgcgcgccgcttt
gaggccgagctggaggacgaggacgccgacccgctcggcagttttctcgcccatgcggcg
cttgaggccggcgagggccaggccgacggtcatgaggatgccgtgcagctgatgaccctg
cacagcgccaaggggctcgaattcccggtggtcttcgtcactggcgtcgaggaggggctg
tttccacacagcatgtcggccgacgaccccgaccgccttgaggaggaacgccggctttgc
tatgtcggcatgacccgcgccatgcagcagctctatctcacccatgccgagagccgccgc
ctgcatgggcgcgaggagtacccgatggcatcgcgcttcctgcgcgagctgccagcggcg
ctgatcgaggaagtccgcgctcatggcggtcagcggcgcgcggggccggtgctgagccgg
gcaccggcggacggcgccttccaactcggagagcaggtgctgcaccccaagttcggcacc
ggtgtggtcttaaacagcgagggcaccggcgctagcgcccgcattcaggtcaacttcgag
gcggtcgggcccaagtggctggtgcttgcctatgcgcggctcgaacgcgccagcgaatga
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