Thiorhodovibrio litoralis: Thiosp_01896
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Entry
Thiosp_01896 CDS
T09560
Symbol
pbpF_1
Name
(GenBank) Penicillin-binding protein F
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr00550
Peptidoglycan biosynthesis
tlr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Thiosp_01896 (pbpF_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tlr01003
]
Thiosp_01896 (pbpF_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlr01011
]
Thiosp_01896 (pbpF_1)
Enzymes [BR:
tlr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Thiosp_01896 (pbpF_1)
Glycosyltransferases [BR:
tlr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Thiosp_01896 (pbpF_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Thiosp_01896 (pbpF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
DUF769
Motif
Other DBs
NCBI-ProteinID:
WPL12140
LinkDB
All DBs
Position
complement(2115820..2117901)
Genome browser
AA seq
693 aa
AA seq
DB search
MIDRTVLRWGLAAAIVLPLGFLAVLGIGSRLTPPPELNTPVSRLVLDRDGQLLRAAPVAD
GRWRLPLRLSELDPLLIDMLLLWEDRRFYLHHGIDWAAMTRALTQMLSQGRIVSGGSTLS
MQLVRLLERTPTRSLAGKWRQVLGALALERQASKEEILQAYLQHAGYGGNLEGVRSASLA
WFGKEPRRLNAAEAALLVALPQSPERRRPDRFPTATKEARNRVLARAAERGVIDSAIAKQ
AMATPIPRQRRPLPRLAAHRSEHWLQRLPDAQVLQLTLSAPLQRALETLARERADTMDRR
VSLAILVLDHRSGEVLASVGSAAYTDVARDGFIDMTDAVRSPGSTLKPLIYGLGFELGIA
HPESLIEDRPTGFDYYAPANFSGDFAGTVTVREALQRSLNVPAVTMLQQVGPAPMLARLR
RAGAAPQLPGNRPAGLAIALGGIGLRLRDLVALYAAIARGGQPVSPRELLAPGEASPDSP
SSPKPPVLDARAAWYLTSILSGADAMHTGADSIAIKTGTSFGYRDAWAIGFDGRHVVGVW
VGRPDGVPVSGLTGAGTGVPILVDTFARIGPPVPLPAAPEGVLTSGSDRLPPPLKRVGSR
GSGQSAAHPVQIAYPPDGARIDLHSGDGPSATPALVLKARGGQPPFRWVVNDQPIAAEAF
ARSSRWQPDGRGYARILLIDAAGAKATAQVYVD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgcaccgtccttcgctggggtctcgccgcggccattgtcctgccgctcggc
tttctcgccgtgctcggcattggcagtcgcctgacacccccgccggagctgaacaccccc
gtctcgcggctggtgcttgatcgcgacggccagttgctgcgcgccgctcctgttgccgat
ggacgctggcgactgccgctgcgcctgagcgagctcgaccctctgctgatcgacatgctg
ctgctgtgggaagaccggcgcttctatctccaccatggtatcgattgggcagcgatgacg
cgcgcgctgacgcagatgctgagccaaggccgcatcgtctccggtggctccaccctcagc
atgcagttggtgcgactgcttgagcgcacaccgacgcgatctctcgccggcaaatggcgc
caggtcctgggcgccctggcactggagcgccaggcgagcaaagaagaaattctgcaggcg
tatctgcagcatgccggctatggcggcaatctggaaggcgtgcgctccgccagtctggcc
tggtttggcaaggagccgcgacgtcttaacgcggccgaggcggccctattggttgccctg
ccacagtcacctgagcggcgccgtcctgatcgcttcccgactgcgaccaaggaggcgcgc
aatcgtgtcctagcccgcgctgccgagcgcggagtcatcgacagtgcgattgccaagcag
gccatggcgacccctatcccgcgccagcgccgcccgctgccgcgcctggccgcccaccgc
agcgagcactggctacagcgcctgcccgacgcccaggtgctgcagctgaccctgtcggca
cccctgcagcgcgcactcgaaaccctcgcccgagagcgcgcagacaccatggacaggcgg
gtctcgctcgccatactggtcctcgatcaccgcagcggcgaggtgctggcatcggtcggc
tcggccgcctataccgatgtcgcgcgcgacggctttatcgacatgacagacgccgtgcgt
tctcctggatcaacgctgaaaccgttgatttatggcctgggatttgagcttggcatcgcc
cacccggaaagcctgatcgaggaccgcccgaccggctttgattattacgcgccggccaat
ttctccggcgattttgccggcaccgtcacggtgcgcgaggcgctgcagcgctcgctcaac
gtccccgccgtcaccatgctccagcaagtcggcccggcacctatgctcgcccggctcagg
cgcgccggcgccgcgccccaactcccaggcaaccgccctgccggactcgccatcgcgctt
ggcggcattggcctgcgcctgcgcgatctggttgcgctctatgccgccatcgcccgcggc
ggacagccggtgtcgccgcgcgagttgctggcgcccggcgaggcctcacccgactcgccg
agcagccccaaaccgccagttctcgatgcacgcgccgcctggtatctgacctccattctc
tccggtgccgatgccatgcacacaggcgccgactccattgcgatcaagaccggcacctca
ttcggctatcgcgatgcctgggccattggtttcgacgggcgccatgttgtcggcgtctgg
gtcggacgccccgacggggtgccagtcagcggactgacaggcgcgggaactggcgtgccc
attctagtcgatacctttgcccgcattggcccaccggttccgctgcccgccgcgcctgag
ggtgttctcacctccggcagcgaccgcctacccccgcccttgaagcgcgtcggtagccgc
ggcagcggccagtccgctgcgcacccggtacaaattgcctatcccccggatggagcccgc
attgatctccactccggcgatggccccagcgcaacacccgcgttggttctcaaggcccgc
ggcggtcaaccaccctttcgctgggtcgtcaacgaccagcccatcgccgccgaggccttc
gcccgctccagccgctggcaacccgacgggcgcggctacgcccgcattctgctcatcgat
gccgccggtgccaaagcaacagcccaagtctacgtcgactaa
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