Thiorhodovibrio litoralis: Thiosp_02168
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Entry
Thiosp_02168 CDS
T09560
Symbol
rpfC_1
Name
(GenBank) Sensory/regulatory protein RpfC
Organism
tlr
Thiorhodovibrio litoralis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS
PAS_4
Response_reg
HATPase_c
PAS_8
HisKA
PAS_3
PAS_7
ECF-ribofla_trS
5TM-5TMR_LYT
HATPase_c_2
ThiW
HAMP
Motif
Other DBs
NCBI-ProteinID:
WPL12404
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Position
2386230..2390120
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AA seq
1296 aa
AA seq
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MPHSPRKTLNLSITILATLGLALLAVLGNVLTMPLGFGVVLIFGSVFAMLAVVLLGPLPA
MLVGFAGGLYTWVLWGHPYALVVMTLEPLVVGLLYRRGRVNLVMADMAFWLVLGAPLVIL
FYGQFIGLPWSAVLQISLKQPLNGVFNALLAGLLVIGARLLWPRWKLPGSLRMGDLIFHV
VLVSILLAGSLPLVYESYQQRAELEERLRIELAGILDHLALRLERNASEGRLDLDEAMAR
ERLKPDMGLAVTDTAGEILARRGQMNSLDNAEAPLARPPTELRVWMPGGELPLMKRWKQG
RYRLATPVAVAGLGQVVVEAPAAPLVAALEAGSVTLFGFLVLLLLIGISVAAVLSHWLSR
PLRELGILGERLAETVAQGREPRLPNNPLREYNDLAMRLQSMAQSLAASFSELRVTQSGL
EAQVAQRTQQLERLSQVARQTTNGVIITDTEGRVQWTNEGFTRISGYPLDEMLGRKPGEM
LQGAQTDPDTVARIRAAVVAQQPFTENILNYSRAGEPYWINIDCNPLTDADGQVYGFMAI
ESDITAQKRAEDALQLSNLRLRSLFELSPLGIALNDMASGDFIEVNDALITPTDYSREEF
LALSYWDLTPMDYADQEQVQLESLKSTGRYGPYEKEYIRKDGSRYPVLLNGVTIEDPGGT
RIWSIIQDISERKRVEMAIRDQAQQTQAIVDNIVDGIITIDREGMIASANPAALRIFDYP
PEDVIGEHVGMLMPESQGRAHDSYIRNFLATGVARAVGLSREMEGRRRDGTIFPIELAVS
EVSCQDQPMFIGMVRDITERKRVERMKSEFVSTVSHELRTPLTSISGSLGLLLGGAMGEL
PETMRPLLEIAHKNSQRLSYMINDLLDMEKIAAGKMQFDLQETALMPLVEQAVSANLTYG
EARGVRLELTERIAEEIAVRVDSQRLQQVLANFLSNAAKFSPDGSTVEIGVRLRDTCARI
WVRDRGPGIPREFRSRIFQKFSQADASDTRQRGGTGLGLAITKELMERMGGAVGFESVVG
EGATFWADLPVMAHGLAGAQPSPDPDHPTDGPPVLVVEDDPDVAQLLSLMLTRAGYQSQI
ATSGEEALRILGEADLAAMTLDLQLPGIHGLEVIRQVRQNPRTAELPIIVISASVAEGKL
AIDGDLSFVEWLPKPLDDQRLVSVLAQALPDDRVGHPRILHIEDDLDLHQVVKIMVGHRY
QFDHAATLAEARALLAGMEYDLAILDLNLPDGSGWELLPLIRRQSSRPQILILSSMEVSR
NEAEQVEAVLLKSQITPTTLLNALGGRIRRHQEASS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgccccactccccccggaagacactgaacctctcgatcaccatcctggccaccctgggc
ctggccttgctggccgttttgggcaatgtcctgacgatgcctttgggttttggggtggtt
cttatcttcggctctgtcttcgcgatgctggcggtggtcttgctcggaccgctgcccgct
atgctggtcggattcgccggaggactctacacctgggtgctctggggtcatccctacgcg
ctcgtggtcatgacgctcgaaccgctggtggtgggactgctgtaccggcgcgggcgggtt
aacctggtgatggccgacatggccttctggctggtcctgggcgcgcctctggtgatcttg
ttttacggtcaattcattggcctaccgtggtcggccgtgcttcagatctcgctcaaacag
ccgctgaacggtgtcttcaacgcactgctggcgggattgctggtgatcggtgcgcgcttg
ctgtggcccagatggaagctcccggggagcctgcggatgggcgacctgatcttccatgtg
gtgctggtttccatcctgctggccggcagcctgccgctcgtctacgagagttatcagcag
cgcgccgagctggaggaacggctccggatcgaattggccggtatcctcgatcacctggca
ctgcgcttggaacggaacgccagcgaggggcgcctcgaccttgacgaggccatggcgcgg
gagcggctaaagccagacatggggctcgcggtgaccgataccgccggcgagattctggcc
aggcgcggccagatgaatagcctggacaatgccgaggcgcccctcgcccgaccgcctacg
gagctgcgggtctggatgcccggcggcgagcttccgctgatgaaacgctggaagcaaggt
cgttatcgcctggctacgccggtcgcggtggcgggactgggtcaggtggtggtggaagcc
ccggccgcgcccctggtcgcagccctggaagcgggcagcgtgacgctgttcgggtttctg
gtgctgctgttgctgatcggcatttcggtggcggctgtgctgagccactggctcagccgg
ccactgcgcgagcttggaatcctcggcgaacgcttggccgagacggtggcccaggggaga
gagccgcgactgccgaacaatcccctgcgcgagtacaacgacctggcgatgcgcctgcaa
tccatggcgcagagcttagccgccagcttttctgaattgcgtgtgacccagtctgggttg
gaggcgcaggtcgcgcagcgcacgcagcagttggagcgactctcgcaagtggcccgtcag
accaccaatggggtcatcatcaccgacaccgagggccgggtgcaatggacaaacgaggga
ttcacccgtatttcaggttatccactcgatgagatgctcggtcgcaagccgggcgagatg
ctccagggcgctcaaaccgatcccgataccgtcgcacgcatccgcgcggcagtcgttgcc
cagcagcccttcacagagaacatcctcaactacagccgcgctggcgagccctactggatc
aacatcgattgcaatcccttgacggacgccgacggccaggtctacggcttcatggccatc
gagtccgacatcacagcgcagaaacgggccgaggatgccctgcagctgagtaacttgcgc
ctgcgcagcctgtttgagctgtcgcccttggggattgccctgaatgacatggcgagcggc
gatttcattgaggtcaatgacgccctgatcacgccgacggattacagtcgggaggaattc
ctcgcgctgagctactgggatctcaccccgatggattacgcggaccaggagcaggtccag
ctcgagagcctgaagtccaccggccgctacggtccctacgagaaggagtacatccgcaag
gacggcagccgctacccggtgctgctgaacggggtgacgatcgaggatcccggtggcacc
cgcatctggtccatcatccaggacatctccgagcgcaagcgcgtcgagatggcgattcgc
gaccaggcccagcagacccaggccattgtcgataacatcgtcgatggcatcatcaccatt
gatcgcgagggaatgatcgcctcggccaatccggcggcgctgagaatcttcgattatccc
cccgaggacgtgattggagagcatgttggaatgttgatgcccgagtcccaggggcgcgcc
cacgacagctacatacgcaatttcctggccaccggagtagcccgggccgttggtctcagc
agggagatggaaggtcggcgtcgcgacgggaccatcttcccgattgagctcgcggtctcc
gaggtcagttgccaggaccagccgatgttcatcggcatggtacgcgacatcaccgagcgt
aagcgggtggaacggatgaagagtgaattcgtttcgacggtcagccatgaactgcgcacg
cccctgacctcgatttccggctccctgggtctgctgctcgggggtgccatgggcgagctg
ccggagaccatgcgcccgctgcttgagatcgcgcacaagaacagccaacgcttgagctac
atgatcaacgacctgctcgacatggagaagatcgcggccggcaagatgcagttcgacctg
caagagaccgccctgatgcccctggtggagcaggcggtgagcgccaacctgacctatggc
gaggcacgtggggtgcgccttgagctgaccgagcggattgccgaggagatcgcggtgcgg
gtcgacagccagcgcttgcagcaggtcctggccaattttctctccaatgccgccaagttc
tcgcccgacggcagcaccgtcgagatcggcgtgcggctgcgcgacacctgcgccaggatc
tgggtgcgggatcggggacccggcattccgcgggaattccgttcccggattttccagaag
ttctctcaggccgacgcctccgacacccgacagcggggtggcaccgggctggggttggcc
atcaccaaggagctgatggagcgcatgggcggcgcggtcggtttcgagtcggttgtcggc
gagggggccaccttctgggccgacctgccagtcatggcgcacggcttagcgggggcgcaa
ccgtcgccggacccggaccatcccaccgatggaccgccggttctggtggtggaagacgat
cccgacgttgcccagttgctgagcctgatgctgacccgggccggctaccaaagccagatc
gcgaccagtggcgaggaggccttgcgcatcctgggcgaagcggacctagccgccatgacg
ctggacttgcaactgcccggcatccatggtctggaagtcatccgacaggtgcgtcaaaat
ccccgcacggcggaactgccgatcatcgtgatttccgccagcgtggccgagggcaagctg
gccattgacggggatttgtccttcgtcgagtggctccccaagccgctcgacgaccagcgt
ctggtatccgtcctggcacaggcattgcctgatgaccgggtgggtcatccgcgcattctc
catattgaagacgacctggatttgcaccaagtggtcaaaatcatggtcggccatcgctac
cagttcgaccatgcggcgaccctggccgaggcacgcgccctgttggccgggatggagtac
gatctggcgattctggatctgaacctgcccgatggctcgggctgggagttgctgccgctg
attcgtcgccaatcatcccggccacagatcctgatcctgtcgagtatggaggtatcgcga
aacgaggcggagcaggtcgaggcggttctgctgaaatcccagatcacgccaacaacgctg
ctcaacgcgcttggcggtcgcattcgaagacatcaggaagcatcctcatga
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