Thiorhodovibrio litoralis: Thiosp_02311
Help
Entry
Thiosp_02311 CDS
T09560
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlr03016
]
Thiosp_02311 (truD)
Enzymes [BR:
tlr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Thiosp_02311 (truD)
Transfer RNA biogenesis [BR:
tlr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thiosp_02311 (truD)
Prokaryotic type
Thiosp_02311 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
WPL12539
LinkDB
All DBs
Position
2547310..2548500
Genome browser
AA seq
396 aa
AA seq
DB search
MDGLSAQPSASAETQDFVRDFVPFDALPRAHGPALVQCLLRAAPEDFLVEETLSFSPDDE
GSHWLLQVRKTGANTEWVARQLARIADVPVRDIGYAGLKDRHAVAIQWFSLPLGEGPAPD
WSPLVDDGVEVLGCHRHGRKLRRGAIASNSFALRLRELSGDVAALATQLEAIARYGVPNY
FGPQRFGRDGGNLAEAGALLVGTGTGTGSRTATGARAGIEAGASGGKGRGRRLSRHRRGL
LLSAARSALFNQVLARRVALGNWNQALPGERLQLAGSHSHFLAETLDETIIERLASGDIS
PTGPLCGAGESLTTGVAAELEAQALAPWTDWIDGLARAGLRAERRALILRPLDLTHQLEA
EDCLMLRFRLPAGAYATSVLRELADWSEPAPIGREQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggacggtctctcagctcagccaagcgcctcggcggaaacccaggatttcgtccgggat
ttcgtgcccttcgacgccttgccgcgcgcgcatggcccggcgctcgtgcaatgtctgctg
cgcgccgcgcccgaggactttctcgtcgaggagaccctgagcttctcgcccgacgacgag
ggttcgcactggttgctgcaggtgcgcaagacgggcgctaataccgagtgggtggcgcgt
caactggcgcggatcgcggatgtgccggttagggatatcggctacgccggcctgaaggac
cgccacgcggtggccatccagtggttttccctgcccttgggcgaggggccggcgccggac
tggtcaccgttggtggatgatggcgtcgaggtccttggctgtcaccgccatgggcgcaag
ctgcgtcgcggggcgattgcctcaaacagcttcgcgctgcgcctgcgcgagttatccggc
gatgtagcagctctggcaacgcagctggaagccatcgcccgctacggcgtgccgaactac
ttcgggccccagcgcttcggtcgcgacggcggtaatctggcggaagctggggcgctcttg
gttgggaccggaactgggactggaagtaggaccgcaaccggggcacgcgccgggattgaa
gccggagcttcgggcggcaagggcaggggacggcgcctgtcccgtcatcgccgcggtttg
ttgctgtctgccgcgcgctcggccttgttcaatcaggtactggcgcgacgcgtcgcgctt
ggcaactggaaccaggctttaccgggcgaacgactacagctggcggggagtcattcgcat
tttctggcggaaacgcttgatgaaactatcatcgagcgccttgccagtggcgatatatcg
cccaccggcccgctgtgcggggcaggagaatccctgacaaccggcgtggccgcggagttg
gaagctcaagcgctggctccgtggacggattggatcgatggactcgcgcgcgcgggtttg
cgcgcggagcgccgtgcgctgatactgaggcccctggacctgactcaccagcttgaggcc
gaagactgcctgatgctgcggtttcggctgccggcgggtgcttatgcgacctccgtgctc
agagagttggcagactggagcgagccggcgccgattgggcgggagcagtga
DBGET
integrated database retrieval system
