Thiorhodovibrio litoralis: Thiosp_02343
Help
Entry
Thiosp_02343 CDS
T09560
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_02343 (phrB)
Enzymes [BR:
tlr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Thiosp_02343 (phrB)
DNA repair and recombination proteins [BR:
tlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Thiosp_02343 (phrB)
Prokaryotic type
Thiosp_02343 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPL12571
LinkDB
All DBs
Position
complement(2588630..2590108)
Genome browser
AA seq
492 aa
AA seq
DB search
MPTTAILWFRRDLRLEDNPALMAAIDHFERILPLYIHAPEEEAPWAPGAASNWWLHHSLS
ALDQSLRERGSRLLIMRGAPLGCLRALINEIGANGASAVFWNRCYEPATVARDSRIKQQL
RADGIRCESHNASLLFEPWDVKTGADQPFKVFTAYWRRCQPRLSKMPPPKPAPERLEPVA
LPSAAFGVLEHEQPLDALDLLPRIGWDAAFPDQWQPGAAGAQAQLRRFIDQAAADYAQAR
DLPAVLGTARISPHLHFGEIGPRQILAIAKAASDDTQAFVRQLGWREFSASLLYHFPHTA
DEPLNPLFEAFPWRDPVPSELLRAWQRGQTGIPLVDAGMRELWHSGWMHNRVRMIVASFL
TKNLRIPWQVGARWFWDTLVDADLANNTQGWQWTAGCGADAAPYFRIFNPVRQGERFDPD
GDYIRRWCPELAQLPKRHLHQPWKAPVAILQQAGIELGTNYPRPIVDLADTRREALAFWQ
QLRTADIRADLA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacgacagcgatcctgtggttccgccgcgacctgcgtctggaagacaatccagca
ctcatggccgcgattgatcacttcgaacgcatcctgccactttatattcacgctcccgag
gaagaagcgccctgggcgcccggcgcggcctccaactggtggttacaccatagcctaagc
gcgctcgatcaaagcctgcgcgagcgcggttcgcgattgcttatcatgcgcggcgccccc
ctcggctgcctgcgcgcgctcatcaatgagatcggggcgaacggggcaagcgcagtgttc
tggaatcgctgctacgagccggccacggtggcccgcgacagccgcatcaagcaacagctc
agggccgatggcatccgctgcgaaagccacaatgccagcttgctgttcgagccctgggac
gtaaaaaccggcgcggatcaaccgttcaaggtcttcacggcctactggcgacgctgtcag
ccccggctctcgaagatgcccccaccaaagccggcacccgagcgactagagccggttgca
ctgccgtccgccgcattcggcgtgcttgaacatgaacagccgcttgatgcattggacctg
ctgccgcgcatcggctgggatgccgcctttcccgaccaatggcagccaggtgctgcgggt
gctcaagctcagcttcgccgctttattgatcaggccgcagccgactacgctcaggcgcgc
gacctgccggctgtcctcggcacggcgagaatctcaccacacctgcattttggcgagatc
ggaccgcgtcagatcctagccatcgccaaggccgcaagcgacgacacccaagcctttgtg
cgccaactcggctggcgcgagttcagcgccagtctgctgtatcattttccgcacacggca
gatgaaccattgaatcctctgtttgaggcattcccctggcgcgacccggttccgagcgag
ctcttgcgtgcatggcaacgcggccaaacgggaatcccgctggtcgatgccggcatgcgc
gagctctggcacagcggttggatgcataaccgggtacggatgatcgtcgcctcctttctc
accaaaaacctgcgcattccctggcaagtcggcgcacgttggttctgggacaccctggtg
gatgccgatctggccaacaacacgcagggctggcagtggaccgccggctgcggtgccgat
gcagcgccctactttcgcatcttcaatcccgtgcgtcagggcgagcgcttcgaccccgat
ggtgactacatccgccgctggtgccccgagcttgcccagctgccaaagcgccatctgcac
caaccctggaaggcgccggttgcaatattacaacaggctggcatcgaactcggcaccaac
tatcctcgccctatcgtcgatcttgcagatacccggcgcgaagccttggcattttggcaa
cagttgcgtactgctgacattcgagcagatttagcgtaa
DBGET
integrated database retrieval system
