Thiorhodovibrio litoralis: Thiosp_02500
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Entry
Thiosp_02500 CDS
T09560
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thiosp_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_02500
Enzymes [BR:
tlr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Thiosp_02500
DNA repair and recombination proteins [BR:
tlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Thiosp_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WPL12722
LinkDB
All DBs
Position
2757740..2758459
Genome browser
AA seq
239 aa
AA seq
DB search
MFAPVTFDPSCRTCARLADFLDSVRAEHPDYHAAPVPPFGDPNARLLIVGLAPGMHGANR
SGRPFTGDYAGILLYASLHRHGFGSRAESVSADDGLKLRNCRITNAVKCLPPANKPLPAE
MHACNRYLGAELAGLPAGAVVLALGQIAHRAVLLGCGLKQSALKFAHGAEHELPGGLRLV
DSYHCSRYNTQTRRLTEAMFDQVMARCRMLVDQAGPRASAAAEPEPGPDPDPVTGAGMA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgcccgtgacctttgaccccagctgtcggacttgcgcgcgcctggccgatttc
ctcgacagcgtgcgggccgagcatcctgactaccatgccgccccggtgccgccttttggc
gatccgaatgcgcgcctgctgatcgtcgggctggcccctggtatgcacggtgctaaccgc
agcggccggcctttcacgggtgattatgctggcattctgctctatgccagcttgcatcgg
cacggcttcggcagtcgcgcggagtcggttagcgctgacgatgggctgaagctccgcaac
tgccgaatcaccaatgcggtcaaatgcctgccgccggctaacaagccgctgccggcggag
atgcacgcctgcaatcgctatctgggggccgagttagccgggctgccggccggcgccgtg
gtgctggcgctgggtcagatcgcgcaccgggcggtgctcctggggtgcgggctcaagcag
tctgcgctcaagttcgcgcatggcgcggagcatgaactgcccggcggactgcggctggtg
gattcctatcattgcagccgctacaacacccagacgcggcggttaaccgaggcgatgttc
gatcaggtgatggcgcgctgccgcatgctggtcgaccaggccggcccgagggctagcgcg
gctgctgagcctgagcctggtcctgatccagatccggtaactggcgccgggatggcctga
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