Thiorhodovibrio litoralis: Thiosp_02550
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Entry
Thiosp_02550 CDS
T09560
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Thiosp_02550 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlr03019
]
Thiosp_02550 (orn)
03009 Ribosome biogenesis [BR:
tlr03009
]
Thiosp_02550 (orn)
Messenger RNA biogenesis [BR:
tlr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Thiosp_02550 (orn)
Ribosome biogenesis [BR:
tlr03009
]
Eukaryotic type
Pre-60S particles
RNases
Thiosp_02550 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WPL12771
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All DBs
Position
2816956..2817504
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AA seq
182 aa
AA seq
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MAGNEDNLIWMDLEMTGLDPFTDRILEMAVIITDSHLEVVAEGPVLAVRQSEEVLAGMDE
WNRQHHGDSGLIERVRFSDQDEASAEEQMLSFLQLHCKAGKSPLCGNSICQDRRFLARFM
PRLEAFLHYRNLDVSTLKILAQRWAPAVVDNFKKSNRHEALSDIRESIDELKHYRAEFLC
VH
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaacgaagataacctgatctggatggatctggaaatgacgggtcttgatccc
tttacggatcgaatcctcgagatggcggtcattatcaccgacagtcaccttgaggtggtg
gcggaagggcctgtgctcgcggtgcgccagtccgaggaagttctggctggcatggatgaa
tggaaccgtcagcatcatggtgactcgggtctgattgagcgggtgcgcttcagcgatcag
gacgaggccagcgctgaggaacagatgctgagctttttgcagcttcactgcaaggccggc
aagtcgcccttgtgtggcaacagtatctgtcaggaccgccgcttcctggcccgcttcatg
ccccgactcgaggcgtttttgcattatcgcaacctggatgtcagcacgctgaagattctc
gcccagcgctgggcgccggccgtggttgataacttcaagaaaagcaatcggcacgaggcc
ctgtccgacatccgcgagtccatcgacgagctcaagcattatcgcgccgagtttttgtgc
gtgcattga
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