Thiorhodovibrio litoralis: Thiosp_02824
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Entry
Thiosp_02824 CDS
T09560
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiosp_02824 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlr03019
]
Thiosp_02824 (rhlE)
Enzymes [BR:
tlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Thiosp_02824 (rhlE)
Messenger RNA biogenesis [BR:
tlr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Thiosp_02824 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WPL13039
LinkDB
All DBs
Position
complement(3133075..3134391)
Genome browser
AA seq
438 aa
AA seq
DB search
MSFSDLGLSAELLRAVEAQGYTQPTPIQRQAIPAVLDGRDVMAGAQTGTGKTAAFTLPLL
QRLSESSQPTTQDSSGRGAPRSRRPRALVLTPTRELAAQVGESVRAYGQFLPLRALQIFG
GVGIGPQTNELRRGVDILVATPGRLLDHADQGNLSLAGIELLVLDEADRMLDMGFMPAIR
RVLKLLPAKRQNLLFSATYSREIEQLATGLLTHPLRIEVARRNTAAETVRQLAHPIARGH
KRALLSHLIASGGWDQTLVFTRTKHGANRLAQQLERDGISAAAIHGNKSQSARTRALADF
KRGAVRTLVATDIAARGLDIERLPHVVNYELPNVPEDYVHRIGRTGRAGENGTAVSLVSP
EERSLLAGIERLLGRRIDNQPVAGFSDRPASSGETEDSADARPRSRPPRARRQTPPGAGG
RGRKSPRSASRDAPRAAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttccgacctcggcctgtcggccgaactgctgcgcgctgtcgaagcgcaaggc
tatacccagcccacaccgattcaacgtcaggccatcccggctgtcctcgacggtcgcgat
gtaatggccggcgcccagaccggcaccggcaagacggccgccttcaccttgccgctgttg
caacgcctgagcgaaagctcccagccgaccacacaagactcctcaggccgcggcgcgccc
cgctcacgcaggccgcgcgcgctggtgctgacgcccacgcgcgaactggccgctcaggtt
ggcgagagcgtgcgcgcctacggccagttcctgccgctgcgcgccctgcagatttttggc
ggtgtcggcattggaccacaaaccaacgagttgcgccgtggcgttgatattctggtcgcc
acccccgggcgcttgctcgaccacgccgatcaggggaatctgagtctggctggaatcgaa
ctgctggtgctcgacgaggccgaccgcatgctcgacatgggcttcatgcccgccatccgc
cgcgtgctcaagctgctgccggcaaagcgccagaacttattgttctccgccacctattca
cgcgagatcgagcagctggccaccggcctgctgacccatcctctgcgcatcgaggtcgcg
cgccgcaataccgcggccgagaccgtgcgccagctggcgcacccaatcgcccgcggccac
aaacgcgcgctgctctcgcacctgatcgccagcggcggctgggatcaaaccctggtcttc
acccgcaccaagcatggcgccaaccggctcgcgcagcaactcgagcgcgatggcatcagt
gcagcggccattcatggcaacaagagccagagcgcccgcacccgcgcgctggccgatttc
aaacgcggcgcggtgcgcaccctggtcgccaccgacatcgccgcgcgcgggctcgacatc
gaacgtctgccgcatgttgtgaattacgagctgccgaacgtgccggaggactatgtccac
cgcatcggccgcaccgggcgagctggggagaacggcaccgcggtctcgctggtcagcccg
gaggaacgctcactgctcgccggcattgagcgtttgctcggtcggcggatcgacaatcag
ccagtcgcgggtttttccgaccgcccggcgagcagcggggagacggaggattccgcggat
gcccgtccgcgctctaggccaccgcgggcacgtcgccagacaccgccaggtgctggcggg
cgcggacgcaagagcccccggtctgcgagcagggacgcaccaagagccgcgcgttag
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