Thiorhodovibrio litoralis: Thiosp_02958
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Entry
Thiosp_02958 CDS
T09560
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03030
DNA replication
tlr03430
Mismatch repair
tlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thiosp_02958 (holA)
03430 Mismatch repair
Thiosp_02958 (holA)
03440 Homologous recombination
Thiosp_02958 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlr03032
]
Thiosp_02958 (holA)
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_02958 (holA)
Enzymes [BR:
tlr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thiosp_02958 (holA)
DNA replication proteins [BR:
tlr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thiosp_02958 (holA)
DNA repair and recombination proteins [BR:
tlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thiosp_02958 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WPL13164
LinkDB
All DBs
Position
complement(3280771..3281787)
Genome browser
AA seq
338 aa
AA seq
DB search
MKLRPDQLQGQFRKGLAPVYLVCGEEPLQFKETVDAIRAQAREQGFSERQVLEHSKDFDW
SSLAAEAGNLSLFADRRMIELRVNDKLGREGADAIRAYCQKPGEDVLLLIQAPALGWKDL
KTKWAQALDKVGVILEVRRLQGPALVQWLDRRLRAKGFVPTPELAALLAERVEGNLLAAD
QEVSKLALLLEPGPIDPEAMRAAVGNSARYDLFDLTGAALAGDRARTQRIVRGLAGEGTA
EPLVLWVLARELRMLAAVAFAKRTRQDVNAAFQAHQVWDSRRDGVLKALERYSVPYLWRL
LLECAAVDLAIKGRGDGDPWTMLARIADGLAQGARARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgccctgaccaactccagggccaattccgcaagggattggcgcccgtttat
ctggtctgcggcgaagagcctctgcagttcaaggagactgttgacgcgattcgcgcccag
gcgcgtgagcagggtttcagcgaacggcaggtgctagagcactccaaggatttcgactgg
tcgtccctggccgccgaggcgggtaatctgtcgctctttgccgatcggcgcatgatcgag
ttgcgagtcaatgacaagcttggccgcgagggcgccgatgcgatccgcgcctattgccag
aagcccggcgaggatgtgctgctgctgatccaggcaccggcgcttggctggaaagatctg
aagaccaaatgggcgcaggcactggataaagtcggtgtgatacttgaagtgcgccgcctg
caaggaccggccttggtgcaatggcttgaccgacgcttgcgcgccaaaggctttgtgccc
acgccagaattggctgcgctgctggccgagcgggtcgaaggcaatctgctcgccgctgat
caggaagtcagcaagctcgcgttgctgctcgagccgggtcccatcgacccagaagccatg
cgcgccgccgtgggcaacagtgcgcgctatgacttgttcgacctgaccggagcggcactc
gccggagaccgcgcccgcacgcagcgcatcgtccgcggcctggccggggagggcaccgcc
gaacccctggtgctctgggtgctggcgcgcgagctgcgcatgctcgctgcggtcgctttc
gcgaaacggacgcgccaggacgtcaatgcggcgtttcaggcccatcaagtctgggacagc
cgtcgtgatggcgtgctcaaggcgctggagcgatactcggtgccctacctgtggcgcctg
ctgctcgaatgcgccgccgtcgacctcgccatcaaaggccgcggcgacggtgacccctgg
accatgctcgcgcgcatcgccgacgggctcgcgcagggcgcgagagcacgcggttag
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