Thiorhodovibrio litoralis: Thiosp_03010
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Entry
Thiosp_03010 CDS
T09560
Symbol
cmpR
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlr03000
]
Thiosp_03010 (cmpR)
Transcription factors [BR:
tlr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Thiosp_03010 (cmpR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WPL13216
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Position
complement(3344065..3345102)
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AA seq
345 aa
AA seq
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MPRKIVIKGALSDQGLGSSGADYLVRHCTLRQLQLLEAIVRLGSFTRAAEELFLTQPTVS
MQIKKLSESIGTPLFHHVGRNVEPTDAGREVYAACRGILNGLANLETKLADLKGLRRGRL
RLGVITTATYVAPEILGAFCQRYTGIDVSLNVTNRDQLLERLSAQDDDLYVMGQHHDLGH
EVDAVPFAPNPLVMIARSDHPLVGQSNIPMSRLADENILLREPGSGVRDAVLRHFAAAGV
EPRVRMQLGSSETIKHAILGGLGISALSLHSVRLESGGGRFAVLDVEGFPIRRRWHIVYS
SARELSLVARTFLDFAIASEPDIRAQLNEAMNALISVSGLANDDA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaaaatcgtgatcaagggcgcgctgtccgatcaaggtctgggcagctcgggc
gcggattatctggtccgtcactgcacgctgcgccagctccagctgctggaagccattgtg
cggctcggcagttttacccgcgcggccgaggagctcttcctgacccagccgacggtctca
atgcagatcaagaagctatcggagtctatcggcacaccgctgtttcatcatgtcgggcgc
aacgttgagcccaccgatgccgggcgcgaggtgtatgccgcctgtcgaggaatactcaat
ggtctcgccaatcttgagaccaagctcgccgacctgaagggcctgcgccgcgggcgcctg
cgtcttggcgtgattaccacggccacctatgtcgcaccggaaattcttggcgccttctgt
cagcgttacaccggcattgatgtgtcgttgaatgtgaccaatcgcgaccagctgctcgag
cggctgtcggcgcaggatgatgacctctatgtgatggggcagcatcacgaccttggccat
gaggtcgatgccgtgccctttgcccccaatccgctggtgatgatcgcgcgcagcgaccat
ccgctggtcggacagtcgaacattccgatgagccgcctggccgatgagaatatcctgttg
cgcgagccaggttccggtgtgcgcgacgcggtgctcaggcatttcgccgccgccggagtc
gagccccgggtgcgaatgcagcttggcagcagcgagaccatcaagcatgcgatcctcggc
ggtttggggatctcggcgctgtccctgcactcggtgcggctcgaaagcggcggcgggcgc
ttcgcggtgcttgatgttgagggctttcccattcgcaggcgctggcacatcgtctactcc
agcgcgcgcgaattatctctggtagcgcgcaccttccttgattttgccattgccagcgag
cccgacatccgtgctcagctcaatgaggcaatgaacgcactgatatcggtttcgggcttg
gccaatgacgatgcgtga
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