Thiorhodovibrio litoralis: Thiosp_03559
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Entry
Thiosp_03559 CDS
T09560
Symbol
polC_2
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03030
DNA replication
tlr03430
Mismatch repair
tlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thiosp_03559 (polC_2)
03430 Mismatch repair
Thiosp_03559 (polC_2)
03440 Homologous recombination
Thiosp_03559 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlr03032
]
Thiosp_03559 (polC_2)
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_03559 (polC_2)
Enzymes [BR:
tlr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thiosp_03559 (polC_2)
DNA replication proteins [BR:
tlr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thiosp_03559 (polC_2)
DNA repair and recombination proteins [BR:
tlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thiosp_03559 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WPL13742
LinkDB
All DBs
Position
3886975..3887697
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AA seq
240 aa
AA seq
DB search
MLLRRKTRQAAPSWADYFTRQAQACKTPALKHLYAAGLPTEDSPIGEVPLVALDFETTGL
NPREHAIVSIGLVPFDLRAIRPAAGRYWVVKPPRPLRAESIAIHRITHSEVEHAPPITAI
LDELLDALAGRLVVVHYRNIERPFLEAAVLVNRGERCLFPVIDTMELEARWERQGRLSGL
KRLFGRQPPSIRLAASRARYGLPHYSSHHAKVDAIATAELFQAQMARHFRPNTPVSDLWI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttaaggagaaaaacgcgccaggccgccccgagttgggcggactatttcacccgc
caggcgcaggcctgcaagaccccggcgctcaagcacttgtatgcggcggggctgccaacg
gaggatagcccgatcggagaggttccgctggtggccttggatttcgagaccacgggcctg
aatccccgcgagcacgccattgtcagcattggcctggtgcccttcgacctgcgggccatt
cgcccggcggcgggtcgttactgggtggtcaagccgccccggccactgcgggcggagtcc
atcgccatccatcgcatcacccactcggaggtcgagcacgcgccccccatcaccgcgatc
ctcgacgagctgctggacgcgctcgccggccgcctggtggtggttcactaccgcaacatc
gagcgacccttcctcgaggctgcggtcctggtcaatcgcggtgagcgctgcctgtttccc
gtcatcgacaccatggagcttgaggcgcgctgggagcgccagggccgcctgtcggggctc
aagcgcctgttcggccgccagccgccctccatccggctagccgccagccgcgcccgctac
ggcctgccccattattcgtcgcatcacgccaaggtggatgccatcgccacggccgagctg
ttccaggcccagatggcccggcactttcggccgaacacaccggtttcagatctctggatc
tag
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