Thiorhodovibrio litoralis: Thiosp_03757
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Entry
Thiosp_03757 CDS
T09560
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03030
DNA replication
tlr03430
Mismatch repair
tlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thiosp_03757 (holB)
03430 Mismatch repair
Thiosp_03757 (holB)
03440 Homologous recombination
Thiosp_03757 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlr03032
]
Thiosp_03757 (holB)
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_03757 (holB)
Enzymes [BR:
tlr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thiosp_03757 (holB)
DNA replication proteins [BR:
tlr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thiosp_03757 (holB)
DNA repair and recombination proteins [BR:
tlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thiosp_03757 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
DUF6587
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WPL13930
LinkDB
All DBs
Position
complement(4084991..4086043)
Genome browser
AA seq
350 aa
AA seq
DB search
MSDQAALPIPERGQGFPPWLEAHWQRLWSAHRGKRLGHAWLLAGPVGLGKRHFAERLARA
LLCQHPAENGAPCGTCGECRLIDAGSHPDLQRIVPDAESASGEIKVEAIRALIGLENLTS
HRGHYKVIEIVPAEAMTRTAANSLLKTLEEPTDRTLLLLIADDATRLPATIRSRCQHLVF
VPPAESQALPWLTAAIGAPPAPPELLLRLAQGAPLRALSMAQADYLDMRRQGFSQFLAVA
EGREDPLAVAAAWQSRDVPALLEIALGWVCDIARLAGAPQSDYLGNPDLREVLQGLAARL
PRERLHEFARQLMRARSLVQSSVNKQLLLESLMMRWAQLAATRAGPSRSC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaggcggctttaccgatccctgaacgcggccaggggttcccgccctggctc
gaggcgcattggcagcgactctggagtgcgcatcgcggcaagcgactcgggcatgcctgg
ctgttggctggcccggtcgggcttggcaagcggcactttgccgagcgtttggcgcgcgcg
ctcttgtgtcagcacccggcggaaaatggtgccccttgtggtacttgcggtgaatgtcgc
ctgatcgacgccggcagtcatccggatttgcagcgcattgtgcccgatgccgagagcgcg
agcggggagatcaaggttgaagcaatccgcgcgctgatcgggctcgagaatctcactagc
catcgtgggcactacaaggtcatcgagattgtgccggccgaggcgatgactcggaccgcc
gccaacagtcttctcaagacccttgaagaaccgaccgatcgcaccctgctgctgctgatt
gctgacgatgcgactcggcttccggcgaccattcgcagtcgctgccagcatctggtcttt
gtgccgcccgcggaatctcaggcgttgccctggttgaccgctgcgattggggctccgcca
gcgccgcccgagttgctgttgcgcctggcccaaggtgcgcccctgcgcgcgctcagcatg
gcgcaggcggactacctcgacatgcgccggcaaggtttttcccagtttctggcagttgcc
gaaggacgcgaagaccccttggcagtcgctgctgcctggcagtcgcgggatgttcccgcg
ctgctcgagatcgccttgggctgggtgtgcgatatcgcgcgcctcgccggtgctccgcag
tcggactatctcggcaatccggacttgcgcgaggtgctgcaaggactggcggcgcgcctg
ccgcgcgagcggttgcatgagtttgcgcggcagctgatgcgggctcgctcgcttgtgcag
tcctcggtcaacaagcaattgttgctcgagtcgctgatgatgcgctgggcgcagttggcc
gccacgcgcgccgggccgtcaagatcctgctga
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