Thiorhodovibrio litoralis: Thiosp_03872
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Entry
Thiosp_03872 CDS
T09560
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr00220
Arginine biosynthesis
tlr00240
Pyrimidine metabolism
tlr00250
Alanine, aspartate and glutamate metabolism
tlr01100
Metabolic pathways
tlr01110
Biosynthesis of secondary metabolites
tlr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Thiosp_03872 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Thiosp_03872 (carB)
00220 Arginine biosynthesis
Thiosp_03872 (carB)
Enzymes [BR:
tlr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Thiosp_03872 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WPL14040
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Position
complement(4206982..4210188)
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AA seq
1068 aa
AA seq
DB search
MPKRTDIHSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPITWRVLERIIEIERPDALLPTMGGQTALNTALDLARHGVLERFGVEMIGASR
EAIDKAEDRDLFRQAMRRIGLDMPHSVIAHSLEEAFQVQAQIGFPAIIRPSFTMGGSGGG
IAYNAEEFEEICRRGLDLSPTRELLIEESALGWKEYEMEVVRDHADNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPEDGRMIIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNEITGGATPASFEPTIDYVVTKVP
RFAFEKFPLADAHLTTQMKSVGEVMAIGRTFQESLQKALRGLETDKDGLNNMLDLADPSA
IKRLRTEIAQPGAERIFYLVDGMRAGMTAEEIQELSGIDPWFIAQIEELVAIAHDVKVQG
IDVLDEQRLRLLKRKGFSDRRLATLTGTTEQQIRDRRHACGVRPVFKRVDTCAAEFAAST
AYMYSTYEEECEAQPTDNKKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEQPFGVIVQYGGQTPLKLARDLEAAGVPI
IGTSPDSIDLAEDRERFQQLIHQLELKQPPNCTARSEEEALRLAATIGYPLVVRPSYVLG
GRAMELVYDDQELARYIRSAVSVSNESPVLLDRFLEDAIEIDVDAVCDGERVLIGGIMEH
IEQAGVHSGDSACSLPPYTLSASVQDRLREQMSRMGLALGVRGLMNAQFAIKGDDIYILE
VNPRASRTVPFVSKSIGVPLAKVGARCMVGRSLTEQGLHAEVKPKHFFVKEAVFPFIKFP
GVDTVLGPEMKSTGEVMGIGETFGEAFGKAVEGAGTQLPRPGKAMLSVRDADKCRLERVA
RSLLALGFQLYGTHGTAEAMRAAGLPCEGVNKVKEGRPHIVDMIKNQDISFIVNTSEGVQ
AITDSAEIRRAALQYKVSYTTTMAGAEATCLALEQSGALRVNRLQDLY
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtaccgacattcacagcattctgatcattggcgccgggcccattgtgatc
ggacaagcctgcgagttcgactactccggcgcccaggcgtgcaaggcgctgcgcgaggag
ggctatcgcgtcatcctggtcaacagcaatccggccaccatcatgaccgacccggagatg
gccgatgccacctacatcgagccgattacctggcgggtgcttgagcgcatcatcgagatc
gaacggcccgacgccctgctgccgaccatgggtgggcagacggcgctcaatacggcgctc
gatctggcccgccatggggtgcttgagcgctttggcgtggaaatgatcggcgccagccgc
gaggccatcgacaaggctgaggaccgcgatttgttccgtcaggccatgcgtcgcattggg
ctcgacatgccgcattcggtcatcgcccacagtctggaagaagcctttcaggtgcaggcg
cagatcggctttcccgccatcatccgcccgtccttcaccatgggcggcagcggtggcggt
attgcctacaatgccgaggagttcgaggaaatctgccgccgtgggttggacctttccccg
acgcgcgaactgctgatcgaggaatccgctctcggctggaaagagtacgagatggaagtg
gtgcgcgaccatgcggacaactgcatcatcgtctgctcgatcgagaacttcgaccccatg
ggagtgcacacgggggattccatcacggtcgcaccggcacagacgctgaccgacaaggaa
tatcagatcatgcgcaacgcctcactggcggtgctgcgcgagatcggcgtcgacaccggc
ggctccaatgtgcagttcgccatcaaccccgaagacgggcgcatgatcatcattgagatg
aacccgcgggtctcgcgcagctccgcgctcgcatccaaggcgacgggttttcccatcgcc
aaggtcgcggccaagctggcggtcggctacaccctcaatgagctgcgcaacgagatcacc
ggcggtgcaacgcctgcgtctttcgagccgaccatcgattatgtggtcaccaaggtgcca
cgcttcgcgtttgagaaattcccgctcgccgatgcccatctgaccacccagatgaagtcg
gtcggcgaggttatggccatcggtcgcaccttccaggagtcgctgcaaaaagccctgcgc
gggctcgagaccgacaaagacggcctgaacaacatgctcgacctggccgacccgagtgcc
atcaaacggctgcgcaccgagattgcccagcctggggcggagcggattttctatctggtc
gatggcatgcgtgctggcatgacggcggaggagattcaggaactctccggcatcgatccc
tggttcatcgcccagatcgaagagctggtcgccatcgcgcacgatgtcaaagtccagggc
attgatgtcttggacgagcagcggctgcggctcctgaaacgcaaaggcttttccgaccgg
cgtctggcaacgctcacggggacaacggagcagcagatccgcgatcgccgccacgcctgc
ggcgtgcgcccggtgtttaagcgcgtcgacacctgtgccgctgagttcgccgccagcacg
gcctatatgtattccacctacgaggaagaatgcgaagcccagccgactgacaacaagaaa
atcatggtcctcggcggcggaccgaaccgcatcggccaaggcattgagtttgactactgc
tgcgtgcacgccgcctttgcgatgcgcgaggatggttatgagaccatcatggtcaactgt
aacccggagaccgtctcgaccgactacgacacctctgatcggctctatttcgagccgctc
acgctcgaggacgtgctcgagatcgtcgacaaggagcagcccttcggcgtcatcgtccaa
tatggcggtcagactccgctcaaactggcgcgcgatctcgaagccgccggcgtgcccatc
atcggcacttcgccggactctatcgacctggccgaggaccgtgagcgcttccagcagctc
atccaccagcttgagcttaaacagccaccgaactgcaccgcgcgcagcgaggaagaagcg
ttgagactcgccgctaccatcggctatccgctggtggtgcgcccgtcctacgtgctgggc
gggcgggcgatggaactggtctatgacgaccaggagctcgcgcgctacatccgctcggcg
gttagcgtgtcgaacgaatccccggtgctgcttgatcgtttcctggaagatgctatcgag
atcgacgtcgatgccgtctgcgatggcgagcgggtgctgatcggcggcatcatggagcat
atcgagcaggccggcgtccactccggcgactcggcctgctcgctgcccccctacactctg
tcagcaagcgtgcaggaccggctgcgcgagcagatgagccggatggggctggcgcttggc
gtgcgcggtctgatgaacgcccagttcgccatcaagggcgacgacatctatattcttgag
gtcaatccgcgcgcctcgcgcaccgtgccctttgtgtccaaatccatcggcgtgccgctc
gccaaggtgggcgcacgctgcatggtcggccgcagcctgaccgaacagggcctgcatgcc
gaggtcaagcccaagcactttttcgtcaaggaggctgtcttccccttcatcaagttccct
ggtgtcgacaccgtgctgggcccggagatgaaatccaccggcgaggtcatgggcatcggc
gagactttcggcgaggcctttggcaaggcggtcgagggtgccgggacccagctgccgcgt
cctggcaaagccatgctcagcgtgcgcgatgccgacaagtgccggctcgagcgcgtcgcc
cgcagcctgcttgcactcggctttcagctctatggcacccacggcaccgccgaggccatg
cgcgccgccgggctgccctgcgagggggtgaacaaggtcaaggagggccgaccgcacatc
gtcgacatgatcaagaatcaggacatcagcttcatcgtcaacacctccgaaggggtgcag
gccattaccgactcggccgaaatccgccgcgccgcgctgcaatacaaggtgagctacacc
accaccatggccggtgccgaggcgacctgtctggcactggagcaatccggggccttgcgc
gtcaacagactgcaggatctatactga
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