Thiorhodovibrio litoralis: Thiosp_04228
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Entry
Thiosp_04228 CDS
T09560
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlr03036
]
Thiosp_04228 (smc)
Chromosome and associated proteins [BR:
tlr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Thiosp_04228 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
CCDC39
CENP-F_leu_zip
Nsp1_C
SMC_hinge
AAA_29
DUF4763
COG6_N
FKBP15
DUF1177
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WPL14385
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All DBs
Position
4571180..4574683
Genome browser
AA seq
1167 aa
AA seq
DB search
MRLEKIKIAGFKSFVDPTTVPFPSNLVGVVGPNGCGKSNVIDAVRWVMGESSAKMLRGES
MADVIFNGSTGRKPVGQATIELIFDNSDGGAGGAFAAFGQISVKRQVSRDGQSNYYLNGS
RCRRRDIQDLFLGTGLGPRSYSIIEQGMISRFVEARPEDLRLFIEEAAGISKYKERRRET
ETRMRHTRENLERLEDVREEVTKQLAHLERQAATAEKYRQLRGQEEDLKAQLAALHWRDL
DTDITARERALAAAENALEANRAEQRACEAEIERLRAAHADASEQFNQVQGQYYAVGSEI
ARLEQAISFARESRSRQQSELSRVEQELADATQLGERDRSRLTEIDDELARDQPQLEDAR
EHLEGLAEQLEQSQEALDAVQQQWDELQGRVSEPAQQAQLERGRINQLEQRLAQDQQRVE
RLQQELERLNTAELEARLEHLAERSEGLDERISLAADAQTRASEQLRQAEEERRTLAGRL
DAARTELQSARGRQSSLEALQESALASDDEARANWLDEQGLHDAPRLIDLMEVTQGWETA
VEVALAQALAAVGSADFARHAEQAAGTGLMLFDRSAQATVGASDSDRLLARIKSDWPLDG
LLEQYLCEEDLPAALARRSQLAPGERIVTRDGTLVARDWVQGSAADGQGMTGSLARAEEL
KRLQTQTEELEDVIADLAEQQSTLGDNRQQLEREREAAMNSVTQLSRERASLDAEVGAGR
ARLEHLRERGEALAGELEELAERREGTIEELEDARERLNAALEASEQVAAERDQCGSERD
RLRTALASARAEDQQARSRVAELTLNIETRRASREAIAANIERAAQQLAQLSARREDLRA
ELEAASEPEQDARDKLETQLERRLEVEGELSAARTQMEQLNGEVGEQEQERHRLEQANAN
AQADLAERRVQLQERLVRRRTFEEQLGAEGKDAQRVLEGIDSSANAEQWQQRLNDMGSKI
SRLGNINLAAIDEFQEQSERLRYLEDQHQDIQSSLDTLESAIRKIDRETRTRFKETFDQI
NSGLQALFPRLFGGGNAYLELTDEDLLETGVAIMARPPGKRNASIHLLSGGEKALTAVAL
VFAIFELNPAPFCLLDEVDAPLDDANVTRFCQLVREMSNRTQFIFISHNKVTMEIADQLI
GVTMHEPGVSRLVSVDIDDAARLAGAS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgaaaagataaaaatcgccggttttaagtccttcgtcgacccgaccacggtg
ccttttccgagtaatttggtcggtgttgttgggcccaacggttgcggcaagtcgaatgtg
atcgacgcggtgcgctgggtgatgggcgagagctcggcgaagatgctgcgtggggagtcc
atggcggatgtcatctttaatggctccacggggcgcaaaccggtcggtcaggcgaccatt
gagctgatctttgacaacagcgatggcggtgccggcggcgccttcgcggccttcggtcag
atttcagtcaagcgtcaagtctcgcgcgatggccagtccaattactatctgaacggctcg
cgctgccgccgccgcgatattcaggatctgtttctcggcaccgggctcgggccgcgcagc
tattccatcatcgagcaaggcatgatttcgcgcttcgtcgaggcgcgtccggaagacctg
cggctgttcatcgaggaagccgccggcatttccaaatacaaggaacgccggcgcgagacc
gaaacccgcatgcgccatacccgcgagaacctcgagcggctcgaggatgtgcgcgaggaa
gtgaccaagcagctcgcgcatctggaacgccaggcggcgacggcggaaaaataccgccag
ctgcgggggcaggaagaagacctgaaagcccagctcgccgccctgcactggcgcgacctg
gacactgacatcaccgcccgcgagcgcgccctggcggcggccgagaatgcgctcgaggcc
aatcgtgccgagcagcgcgcttgcgaggcggagatcgagcgcctgcgcgccgcccatgcc
gatgcctccgagcagttcaatcaggtgcagggccaatactatgccgtcggctcggagatc
gcccggctggaacaggccatcagcttcgcgcgcgagagccgcagtcggcagcagagcgag
ctctcgcgggtcgagcaggagctggcggatgccacgcagcttggcgagcgcgaccgcagc
cgtctgaccgaaatagatgacgagctcgcgcgcgatcagccccagctcgaggacgcacgc
gagcatcttgagggcctcgccgagcagctcgagcagtcgcaggaggcgctcgatgccgtg
caacagcagtgggacgagctgcaaggccgcgtcagtgagccggctcagcaggcgcagctc
gaacgcgggcgcatcaatcagctcgagcagcgcctggcccaggatcagcagcgcgtcgag
cgcctgcagcaagagctggagcgcctgaacaccgctgaactcgaggcacggctcgaacac
ctggccgagcgcagcgaagggctcgatgagcgcatcagtctggccgccgacgcccaaacc
cgcgccagcgagcaactgcgccaagccgaggaagaacgccgcaccctggccggccggctc
gatgccgcgcgcactgagctgcaaagcgcgcgcgggcggcagtcatcgctcgaagccctg
caggagagcgcgctggccagtgacgacgaagcgcgcgccaactggcttgacgaacagggc
ctgcacgacgccccgcgcctgatcgatctgatggaagtgacccaggggtgggaaaccgcc
gtcgaggtcgcactcgctcaggcgctggcggccgtcggcagcgccgacttcgcgcgccat
gccgaacaggccgcgggcaccgggttgatgctgttcgaccgcagcgcgcaagccaccgtc
ggggcgagcgacagcgaccgcctgctagcgcggattaaaagcgactggccactcgacgga
ttgctcgaacaatacctgtgcgaagaagacctacccgccgcgctcgcccgacgcagccag
ctggctccaggtgagcgcatcgtcacccgcgacggcaccctggtcgcgcgcgactgggtg
cagggcagcgcggcggacggtcagggcatgaccggcagcctggcgcgtgccgaggagctg
aaacggctccagacccagaccgaagagctcgaagacgtcatcgccgatctcgccgaacag
caaagcaccctgggcgacaaccgccagcagcttgagcgcgagcgcgaagcagccatgaac
agcgtcacccaattgagtcgcgagcgcgcctcgcttgatgccgaggtcggcgccgggcgc
gcgcgccttgagcacctgcgcgagcgcggcgaggcgctcgccggcgaactcgaagaacta
gccgagcgccgcgagggcaccatcgaggagcttgaagacgcccgcgaacgcctgaacgcc
gcgcttgaggccagcgagcaggtcgccgccgagcgcgaccaatgcggcagcgagcgcgat
cgcctgcgcaccgcactggccagcgcgcgcgctgaggaccagcaagcgcgtagccgggtg
gccgagctgaccctgaacatcgagacgcgccgcgcctcgcgcgaggccattgccgccaac
atcgaacgcgccgcgcagcaactcgcccagctcagcgcgcgccgcgaggacctgcgcgcc
gagcttgaagccgccagcgagcccgagcaggacgcccgcgacaagctcgagacccagctc
gaacgccggctggaagtggaaggcgaactcagcgccgcacgcacccaaatggagcaactc
aacggcgaggtcggcgagcaggagcaggaacgccatcgcctcgagcaggccaacgccaac
gcccaggcagacctggccgaacgccgcgtgcagcttcaggagcgcctggtgcgccggcgc
accttcgaagaacagcttggcgccgagggcaaggacgcgcaaagggtgctcgaagggatc
gacagcagcgccaatgctgagcaatggcagcagcgcctgaacgacatgggcagcaaaatc
tcgcgcttaggcaacatcaacctggccgccatcgacgaattccaggagcaatctgagcgc
ctgcgctaccttgaagaccagcaccaggacattcagtcctcgctcgacacactggaaagc
gccattcgcaagatcgaccgtgaaacccgcacccgttttaaggaaactttcgaccagatc
aactcaggcctgcaggcgctgtttccgcgcctgttcggcgggggtaacgcctatctggag
ctcaccgacgaggacctgctcgagaccggcgtggccatcatggcgcgaccgcccggcaag
agaaatgccagcattcatctgctctccggcggcgagaaagcactgaccgcagtggccctg
gtgttcgcaatcttcgagctcaacccggcacccttctgcctgctcgacgaggtcgacgcc
ccgctcgatgacgccaacgtcacacgtttctgccagctggtgcgcgagatgtccaaccgg
acgcagttcattttcatcagccacaacaaagtcaccatggaaatcgccgatcagctgatt
ggcgtgaccatgcatgagcccggcgtctcaaggttggtctcggtcgatatcgatgatgcc
gcgcgtttggcgggggcatcctga
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