Thiorhodovibrio litoralis: Thiosp_04247
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Entry
Thiosp_04247 CDS
T09560
Symbol
crtE
Name
(GenBank) geranylgeranyl pyrophosphate synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr00900
Terpenoid backbone biosynthesis
tlr01100
Metabolic pathways
tlr01110
Biosynthesis of secondary metabolites
Module
tlr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Thiosp_04247 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tlr01006
]
Thiosp_04247 (crtE)
Enzymes [BR:
tlr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Thiosp_04247 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Thiosp_04247 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
Thiosp_04247 (crtE)
Prenyltransferases [BR:
tlr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Thiosp_04247 (crtE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WPL14404
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All DBs
Position
complement(4589555..4590430)
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AA seq
291 aa
AA seq
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MDVMPRIEQALERAIAQGSGEAAPPLLEAATRHAVFPGGGRIRPRLCLAVALACGDDAPV
LSDAAAAALELLHCASLVHDDLPCFDDAATRRGRPSVHAAYGERLAVLVGDGLIVRAFEL
LAWNAGSHPERAARLASIIGRAVGIASGIVAGQAWECEPEVELTEYHRQKTAALFFAATE
AGAAAAGHDSAPWYGFGEKLGLAYQVADDLRDVAVSEADMGKPKGQDQAHGRPSAVAELG
LDGAIGRLRELVAAAVDGIPPCPGQEQLAALVRQEMRRLLPAELADRLDAG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgatgccgcgaatcgaacaagcgctcgagcgcgcgattgcccaaggcagcggg
gaagccgcgccgcccttgctggaagccgcgacgcggcatgcggtcttccccggcggtggg
cgcatccgcccgcgcctgtgtcttgccgtggcgttggcctgcggcgacgatgctccggtg
ctcagtgacgccgccgccgccgccctggaattgctgcattgtgcctccctggtgcatgac
gatctgccctgtttcgatgatgctgccacccgtcgcgggcgtccgtcggtgcatgcggcc
tatggcgagcggctggctgtgctggtgggggatgggctgatcgtgcgcgcctttgagctg
ctcgcgtggaatgcgggctctcatcccgagcgggctgcccgcctggcctccatcatcggt
cgcgcagtgggtatcgcctcgggtatcgtcgccggccaggcctgggaatgcgagcccgag
gtggagctgaccgaataccatcgccagaaaactgccgcgctcttttttgccgcgaccgaa
gccggcgctgccgccgctgggcatgattccgcgccctggtatggcttcggcgagaagctc
gggttggcctatcaggttgctgatgatctgcgcgacgtcgcggtcagtgaagctgacatg
ggtaagcccaaggggcaggatcaggcgcacgggcgcccgagtgctgtagcggagctgggt
ttggatggcgcaatcgggcgtctgcgtgagctggtcgcggcggcggtggacgggattccg
ccctgcccgggccaagagcagctcgccgcgctggtgcgccaggaaatgcgccggctactg
ccggccgagctggcggaccgcctggatgccggctga
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