Thiorhodovibrio litoralis: Thiosp_04326
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Entry
Thiosp_04326 CDS
T09560
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr00061
Fatty acid biosynthesis
tlr00071
Fatty acid degradation
tlr01100
Metabolic pathways
tlr01212
Fatty acid metabolism
tlr02024
Quorum sensing
tlr04146
Peroxisome
Module
tlr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Thiosp_04326 (lcfB)
00071 Fatty acid degradation
Thiosp_04326 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Thiosp_04326 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thiosp_04326 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tlr01004
]
Thiosp_04326 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tlr04147
]
Thiosp_04326 (lcfB)
Enzymes [BR:
tlr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Thiosp_04326 (lcfB)
Lipid biosynthesis proteins [BR:
tlr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Thiosp_04326 (lcfB)
Exosome [BR:
tlr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Thiosp_04326 (lcfB)
Exosomal proteins of breast cancer cells
Thiosp_04326 (lcfB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WPL14480
LinkDB
All DBs
Position
4683011..4684684
Genome browser
AA seq
557 aa
AA seq
DB search
MASINSLPQLFRQSARAFADTPAILTDAKTWTYAELNDASDGIAAGLAARGIAPGDRVGL
YCPNGTDFVCCYLGILKAGACAVPINLLLPPTAIAFALNDAGAKALCFHAVFAEQSAAAL
AEAPGVKLRIGIGPIARDARDGDENHPIESQPTDGRPLTRAPTDPSPKPGSNIDCLLEDL
ITPDTQQPPPLALEIDPVKSPAVILYTSGTTGRPKGAVLTHANLAANATAVAQALGVRSG
VDGDRFLVVLPMFHAFAATVGILTPLLTGAALIPVPRFDPALITDAIGTHRASIFLGVPS
LYAVLLRLDAEQIARWRSVRLCISGGAAMPEAVMQAFEERFSVPILEGDGPTECGPVTCV
NPPDGPRKPRSVGPPIPGVEMRIADPTGNELPDGEHGEVCVRGPSVMRGYWQLPEETQAS
FHGDWFRTGDLGWRDADGWFYLVDRIKDLIISNGMNVYPRIIEEVLVRHPDVAEAAVVGE
PHPLHGEIPVAYITAASEAAALDTSALRDWCRPQLGRHELPRRIERVDSLPKNAAGKILK
RELRRSGEHERGLMKQP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattaattctctcccacagcttttccgccagagcgcgcgcgcctttgccgat
actccggcgattctgaccgacgcaaaaacctggacctacgcggagctcaacgatgccagc
gacggcatcgctgcaggtctggccgcgcgcggcatcgcgccaggcgaccgggtcgggctt
tattgtcccaatggtacggactttgtctgctgttacctcggcatcctcaaggccggcgcc
tgtgcggtgccgatcaatctgttgctgccgccaacggcaattgcctttgcgctcaatgat
gccggagccaaggcgctttgctttcacgccgtctttgccgagcaaagcgccgccgcgctg
gccgaggcgcctggcgtcaaactgcggattggaatcggcccaatcgctcgcgacgcccgt
gacggcgatgaaaaccaccctatcgagagccaaccaactgacggacgcccgttaacccgg
gcaccaacggaccccagcccgaagcccggcagcaacatcgactgcctacttgaggacctg
atcacccccgatacccaacagccaccaccgctcgcgctcgagatcgaccctgtaaaaagt
cccgccgtcatcctttatacctccggcaccacggggcggcccaagggcgcggtactcacc
catgccaatctggccgctaatgcaacggcggtggcacaggcgctcggggtccgcagcggc
gtggatggtgatcgcttcctggtggtgctgccgatgttccatgcttttgccgccaccgtg
ggtattctcacgcctctgctcaccggggcagcgctgattccggtgccgcgtttcgatccg
gctctgatcacggacgccatcggcacccaccgcgcgagcatttttctcggtgtgccgagc
ctctacgccgtgctactgcgactcgatgccgagcaaatcgcccgctggcgctcggtgcgt
ctgtgcatctccggcggcgcggccatgccggaggcggtgatgcaggcgttcgaggagcgc
ttttcggtgcccattctggaaggcgacgggccgaccgagtgcggccctgtcacctgtgtt
aatccgcccgatgggccgcgcaagccgcgctcggtgggtccgccaatccccggggtggaa
atgcgcatcgccgatcccaccggcaacgaactgccagacggtgagcatggcgaggtctgc
gtgcgcggcccgagcgtgatgcgcggctactggcagttaccggaggagacccaggccagc
tttcacggggactggttccgcaccggcgacctgggctggcgcgatgccgacggctggttc
tatctggtcgaccgcatcaaggatttgattatcagtaacggtatgaacgtctacccgcgc
atcattgaggaagtcctggtgcgccacccggatgtcgccgaggccgcagtagtcggtgaa
ccgcacccgctgcacggagagatcccggtcgcctacatcaccgccgcgtcggaagccgcc
gcgctcgacaccagcgcactgcgcgactggtgccgcccgcaactcggccgccacgaactc
ccccgccgcatcgagcgcgtcgacagcctgccaaagaatgccgccggaaaaatcctcaaa
cgcgagttgcgccgcagcggcgagcatgagcgagggcttatgaaacaaccttag
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