Thiorhodovibrio litoralis: Thiosp_04354
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Entry
Thiosp_04354 CDS
T09560
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
tlr
Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlr03019
]
Thiosp_04354
Messenger RNA biogenesis [BR:
tlr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Thiosp_04354
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
AAA_22
SKI
Motif
Other DBs
NCBI-ProteinID:
WPL14508
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All DBs
Position
4712018..4712935
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AA seq
305 aa
AA seq
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MSHGPDPIDQAIEAAADMDFIIVSGLSGAGKSVALNTLEDIGYNCIDNLPLFLLRELALG
LRQSDRALCPDCVGTAVGIDARSHSDDLSQLPAVLMSLSEQGILPQVMFLEAQTERLMTR
FSETRRKHPLTGDARSLAEAIDYERELLEPLRQVADAHIDTTHTNIHELRDLVRGCLGAG
QKPSTSILLQSFGFKKGVPESFDFVFDVRCLPNPHWQEALRGQTGRDPAVIEFLEQFEDV
GAMRDDLTAFVSRWTPCFERDGRSYLTIAIGCTGGQHRSVYMAEALRAHFESAGRRVLLR
HRELP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccatggacctgacccaatcgaccaagctatcgaagcggctgcggatatggacttc
atcatcgtaagcggactttcaggcgccggcaaaagcgtcgccttgaatacgctggaagac
atcggctacaactgcatcgacaatctgccactgttcctgttgcgggagctcgcgctgggg
ctgcgccagagcgatcgggcgctgtgcccggactgcgttggcaccgccgtcggcatcgac
gcgcgcagccattcggacgacctgtcccaactccccgcggtactgatgtcgctgagcgag
caaggcatccttccccaagtcatgttccttgaggcccagaccgagcggctgatgacccgc
ttcagcgaaacgcggcgcaagcatccgctcaccggcgacgcgcgctcgctggccgaagcc
atcgactacgagcgcgagttgctcgagcccctgcgccaggtggccgatgcccacatcgac
accacccacaccaacatccatgagctgcgcgacctggtgcgcggctgtctcggcgccgga
caaaaacccagcacctccattctgctgcaatccttcggcttcaaaaagggcgtgccagag
tccttcgatttcgtcttcgatgtccgctgtctgcccaacccacactggcaggaggcgctg
cgcgggcagaccggacgcgatccggcggtgatagaattcctggaacaattcgaggatgtc
ggcgccatgcgcgacgacctgaccgcctttgtctcccgctggaccccctgtttcgaacgc
gacggacgcagctatctcaccatcgccatcggctgcaccggcggtcagcatcgatccgtc
tacatggccgaagcactgcgcgcccatttcgagagcgctgggcgccgcgttctgttgcgt
caccgggaattgccgtga
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