Thiorhodovibrio litoralis: Thiosp_04805
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Entry
Thiosp_04805 CDS
T09560
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
tlr
Thiorhodovibrio litoralis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
AMP-binding_C
Epimerase
PP-binding
GDP_Man_Dehyd
Motif
Other DBs
NCBI-ProteinID:
WPL14949
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Position
complement(5259416..5262409)
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AA seq
997 aa
AA seq
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MNSTPSVPADLNLDDPQTLPGLFSRVAARMPQRIAVQYGRACITYAELELLSNRVADWLH
RQHRVEHGDLVCIAYPRGIDFMVAMLGALKCGAAYVPIDLREPLERRRAIVEDAAPKCLL
VAANKRGDFDFAAPISLDDLKDPYAWSPEPRRPHIDSGDVACVFFTSGSTGRPKGVLLPH
LSISGLILSPRYLSIDADDRVLSSSSIAFDAASFEIWTALLNGATLVCVDYETIINPEAF
ADFIEHQAISVMWVTSALFDQLVAFRPGMFRRVKYLLSGGDVVNPKTVHKVLNNASGRPR
AFVNGYGPTETGILATFQLITELADPAEPLPIGKALADTVLYVLDENRNPVPSGETGELY
IGGHRLAKGYLNLPERTAEHFLANPFTGDPTDRVYRTGDLVHFRDDGSLAFAGRADRQIK
FRGFRLELDGIEQSLVNHPDIANAAVVMVKVKGEKVLVGYVQPEATQQADFDLEAYKRWL
GEQLPAYSVPGVLMIMDALPVTSRGKIDRKRLPPPVLEETARPDAVKPRTDTERVIWQVW
SQCLDRTEFGVTDDFFALGGSSILLATVYAGIRERIAKPFELDAFLQHPTIEGLAKTIDE
LGGQADHAADRSAAEADAVLDPSIQPVWIQPARDAGAGAVLLTGSTGFLGAHLLAELLEK
TNRSVYCLIKPDAEAGDLQAKQCNALHRLGLDPGDAAERIRPVAGDLAQSGLGLSPVDAQ
RLRDHCSHIIHCGAFVHHIYGYDRLKAANTFSTLALIRLAMRGRPKKLTFVSTASAITEA
DAQGIGYEGRVGPTPADFFGGYALSKWVSERLLEQGFERGLSGLILRPGNIFANSRTGVA
SPAGSNFALLMMRAYLSRGLAPDLDLVFEAVPVDRLAAAMVALTMDDNTDREMLNLSSPH
EIALPEYVGLLSELTGKSIEILPYEDWKRRVIAPLRETDPLYPLTLYFQGGPTEEIQHFE
TRQAQARLGPLGVEFPSDYRELLRNAFDRTLRGAMGL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaaccccgagcgtacccgccgatctgaacctggatgatccgcagaccctgcca
ggcttgttttcccgcgttgccgcgcgcatgccgcagcgcatcgcagtgcagtatggccgt
gcctgcatcacctacgcggagctggaacttctctcgaaccgggtggccgattggctgcac
cgccaacaccgggtcgagcacggcgacctggtctgcatcgcctatccgcgcggcatcgac
ttcatggtcgcgatgctgggggcgctcaagtgcggtgccgcctatgtgccgatcgacctg
cgcgaacctctggagcgccgccgggcgatcgttgaggatgcggcgcccaagtgcctgctg
gtggcagcgaacaagcgcggcgactttgacttcgctgcgcccatcagcctcgatgacctg
aaagacccctatgcctggtcgccggagccgcgtcggccgcacatcgatagcggcgatgtg
gcctgcgtgttctttacctccggctccaccgggcggcccaagggcgtgctgctgccgcac
ctgtccatcagcgggctgatcctgagtccccgctatctcagcatcgatgccgatgaccgg
gtgttgtcatcaagcagcatcgccttcgatgccgcctcgttcgagatctggacagcgctg
ctcaatggcgccaccctggtctgcgtcgactacgagaccatcatcaacccggaggccttt
gccgacttcatcgagcatcaggcgatcagcgtcatgtgggtgacctcggcactgttcgac
cagctggtggccttccgcccgggcatgttccgccgggtcaagtacctgctctcgggcggt
gacgtggtcaatcccaaaaccgtccataaggtgctgaacaacgcgagtggccggccccgc
gccttcgtcaacggctatggccccaccgaaaccggcatcctggccacctttcagctgatc
acggagctggccgatccggccgagccgctgcccatcggcaaggcgctggcggataccgtg
ctctatgtgctggatgagaaccgcaatccggttccgtccggcgagaccggcgagctgtat
atcggcggtcatcgactcgccaaggggtatctgaatctgcccgagcgcaccgccgagcac
ttcttggcgaatcccttcaccggtgaccctaccgacagggtctaccgtactggcgacctg
gtgcactttcgcgacgacggcagtctggccttcgctggccgcgctgaccgccagatcaag
ttccgcggtttccgcctggagttggacggcatcgagcagagtctggtcaaccacccggac
atcgccaacgcggcggtggtgatggtcaaggtgaagggcgaaaaggtgctggtgggctac
gtgcagccggaagccacgcagcaggcggacttcgacctggaagcttacaagcgctggctc
ggcgagcaactgccggcctactcggtgcccggggtactgatgatcatggacgcgctgccg
gtcacctcgcgtggcaagatcgaccgcaagcgcctgccgccaccggtgctggaggagacc
gcgcggccggacgcggtgaagccgcgcaccgacaccgagcgcgtcatctggcaggtctgg
tcccaatgtctggatcgcaccgagttcggcgtcaccgacgacttctttgctctcggcggc
tcgtccatcctgctcgcgaccgtctatgccggcatccgcgagcgcatcgccaagcccttc
gagctggacgccttcttgcagcatccgaccatcgagggcctggccaagaccatcgacgag
ctgggcgggcaggccgatcacgccgccgatcgctccgctgccgaggccgacgccgtgctc
gacccgagcatccagccggtgtggattcagcccgccagggatgccggcgcgggcgccgtg
ctgctcaccggctcgaccggtttcctcggcgctcacctgctcgctgagttgctggagaag
accaaccgctcggtctactgcctgatcaagccagacgccgaggccggcgacctgcaagcc
aagcagtgcaatgccctgcatcgtctcggcctcgaccccggcgatgccgccgagcgcatc
cgcccggtcgccggcgatctcgcccagtccgggctggggttgagtccagtggatgcgcag
cggctgcgcgaccactgctcgcatatcattcattgcggcgccttcgtccatcacatctac
ggctatgaccgactcaaggccgcgaacaccttcagcaccctggcgctgatccgccttgca
atgcgcgggcgcccgaagaagctcacttttgtgtccaccgccagcgccatcaccgaggcc
gacgcccaaggtatcggctacgaggggcgcgtcggaccgaccccggcggacttcttcggc
ggttatgcgctgtccaaatgggtctccgaacggctgctggagcagggctttgagcgcggc
ctgagcggcctgatcctgcgccccggcaacatcttcgccaacagccgcaccggcgtcgcc
agcccagccggcagcaacttcgcgctcttgatgatgcgcgcctacctgtcccgtggcctc
gcgcccgacctggatctcgtgttcgaggcggtgcccgtggaccggctcgccgccgccatg
gtcgccctgaccatggacgataacaccgaccgcgagatgctgaacctgtccagcccgcac
gagatcgcgcttcccgagtacgtcggcctgctgtccgagctgaccggcaaatccatcgag
atcctgccctatgaggactggaagcggcgcgtcatcgccccgctgcgcgaaaccgacccg
ctctatccgctaaccctctacttccagggtggccccaccgaggagatccagcacttcgag
accaggcaggcacaggcccgacttgggccgctgggcgttgagttccccagcgactatcgc
gaactgctgcgcaacgccttcgaccggaccttgcgcggcgccatggggctctga
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