Tessaracoccus lacteus: QH948_03675
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Entry
QH948_03675 CDS
T10309
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tls Tessaracoccus lacteus
Pathway
tls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QH948_03675 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tls03021
]
QH948_03675 (rpoC)
03400 DNA repair and recombination proteins [BR:
tls03400
]
QH948_03675 (rpoC)
Enzymes [BR:
tls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QH948_03675 (rpoC)
Transcription machinery [BR:
tls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QH948_03675 (rpoC)
DNA repair and recombination proteins [BR:
tls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QH948_03675 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WGT47877
LinkDB
All DBs
Position
813162..817103
Genome browser
AA seq
1313 aa
AA seq
DB search
MLDVNFYEELRIGLASADQIREWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAHMITSVDEEARHRDLSSLQAKVETESKQLAARRDADIEARMRKLEED
MAQLEEEGAKADVKRKVREAAEKESGLIRTRAQRQLDRIDEVWSRFKGLKVQDLEGDETL
YREMKKRFGKYFSGSMGAEAIQKRLQTFDLKAESENLREIIATGKGQRKTRALKRLRVVN
AFLTGSNAPAAMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLDDLNHAQNIKAAKRMVERHR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSTNNILKPADGRPVTMPTQDMIIGHYFLTSERHGAGEGHA
FSNLSEAIMAYDRGDLAIGAKCRIRLQGVVSEGRTPDANGMILMDTTLGRALFNEALPAD
FEFVNEVVGKKTLGRIINELAETYPKVEVAAALDNLKDMGFKWASRSGVTVSIGDVQTPP
QKAEILEGYEKRATKIDRLYERGSVTEDERRQELIAIWTDATAELTEAMKENFTTENPIF
MMVDSGARGNMTQMRQIAAMRGLVANPKGDIIARPIKSNFREGLSVLEYFISTHGGRKGQ
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTKTIAVWSVDGTDEESGRTIQVP
VAPFTEGAKVETSSDVETAVYARTLAVDVVDADGTVLAEAGTDLGDAVIAKLVEAGVTQV
KVRSVLTCESAVGTCAMCYGRSLASGKTVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGV
AGDDITQGLPRVTELFEARQPKGKAPIAEADGVVRIEDGDRSRKLVIVRDDGGDDLEYPV
GRRTRLEYDEPSGRRVVIRDGAHVSIGQQLTAGQVDPQDVLRIRGLRKVQEHLVEEVQKV
YGTQGAPIHDKHIEIIVRQMLRRITVIDSGDTSMMPGELVDRATYEAANRQALAEGGRPG
EGRPVLMGITKASLATDSWLSAASFQETTKVLTDAAIQGKSDSLVGLKENVILGKLIPAG
TGLDRYRNIRVEPTEEARASAYTMNYDPYDYSFGSDSLGPAVPLEDMDFGEIR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtgaacttctacgaggaactgcgcatcggcctcgctagcgccgaccagatc
cgcgaatggtcccacggcgaggtgaagaagccggagaccatcaactaccgcacgctcaag
cccgagcgcgacggcctgttctgcgagaagatcttcggccccacccgcgactgggagtgc
tactgcggcaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtgacccgcagcaacgtgcgtcgtgagcggatgggccacatcgagctcgccgcgccc
gtgacccacatctggtacttcaagggcgtcccgagccggctgggctacctgctggacatc
gcgccgaaggacctggagaaggtcatctacttcgccgcgcacatgatcacctccgtcgac
gaagaggcgcgtcaccgcgacctctcgtcgctgcaggccaaggtcgagaccgagtcgaag
cagctcgctgcccgccgcgacgccgacatcgaggcgcgcatgcgcaagctcgaggaggac
atggctcagctcgaggaggagggcgcgaaggccgacgtcaagcgcaaggtccgcgaggcc
gccgagaaggagtccggcctcatccggacccgtgcgcagcgtcagctcgaccgcatcgac
gaggtgtggagccggttcaagggcctgaaggtccaggacctcgagggcgacgagaccctc
taccgcgagatgaagaagcgcttcggcaagtacttctccggctcgatgggcgcggaggcc
atccagaagcgcctccagaccttcgacctgaaggccgagtccgagaacctgcgcgagatc
atcgccacgggcaaggggcagcgcaagacccgcgccctgaagcgcctgcgcgtcgtcaac
gccttcctgacgggctccaacgcccccgccgcgatggtgctcgacgccgtcccggtcatc
cccccggacctgcgcccgatggtccagctcgacggtggccgcttcgccacctccgacctg
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctgaagcggctgctcgatctc
ggcgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtcgactcg
ctgttcgacaacggccgtcgcggacgcccggtgaccggccccggtaaccgccccctgaag
tcgatctccgacatgctcaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgtggtctgccgaaggcgatggcgctcgagctgttcaagccgttcgtcatgaagcgcctc
gacgacctgaaccacgcgcagaacatcaaggccgccaagcggatggtcgagcgccaccgc
ccggtcgtgtgggacgtgctggaagaggtcatcgcggagcacccggtgctgctgaaccgt
gcacccacgctgcaccgcctcggtatccaggccttcgagccccagctgatcgagggcaag
gcgatccagatccacccgctggtctgcaccgccttcaacgccgacttcgacggcgaccag
atggctgtgcacctgccgctgtccgccgaggcgcaggccgaggcccgcgtcctgatgctg
tcgacgaacaacatcctgaagccggccgacggtcgccccgtcaccatgccgacccaggac
atgatcatcggtcactacttcctgacgtcggagcgccacggcgcgggcgagggccacgcg
ttctcgaacctgtccgaggcgatcatggcctacgaccgtggcgacctcgccatcggcgcg
aagtgccgcatccgtctgcagggtgtcgtctccgagggccgcacccccgacgccaacggc
atgatcctgatggacaccacgctgggtcgtgcgctgttcaacgaggcgctcccggccgac
ttcgagttcgtcaacgaggtggtgggcaagaagacgctcggccgcatcatcaacgagctc
gccgagacctaccccaaggtcgaggtcgccgcggcgctggacaacctgaaggacatgggc
ttcaagtgggcctcgcgctccggcgtgaccgtgtccatcggcgacgtccagaccccgccg
cagaaggccgagatcctcgagggctacgagaagcgcgccacgaagatcgaccgcctctac
gagcgcggttccgtcacggaggatgagcgccgtcaggagctcatcgcgatctggacggac
gcgaccgccgagctgaccgaggcgatgaaggagaacttcaccacggagaaccccatcttc
atgatggtcgactccggcgcacgaggaaacatgacgcagatgcgtcagatcgccgccatg
cgaggcctcgtggccaacccgaagggcgacatcatcgcccgaccgatcaagtcgaacttc
cgtgagggtctctccgtcctcgagtacttcatctcgacgcacggtggccgtaagggccag
gccgacaccgcgctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtg
tcgcaggacgtcatcatccgcgaggaggactgcggcaccgagcgtggcctcaccaagacc
atcgcggtgtggagcgtcgacgggacggacgaggagtccggccgcaccatccaggtgccg
gtcgccccgttcaccgagggcgcgaaggtcgagacgtccagcgacgtcgagaccgcggtc
tacgcccgcacgctcgccgtcgacgttgtcgacgcggacggcaccgtgctggccgaggcc
ggcacggatctgggcgacgcggtcatcgcgaagctcgtcgaggccggcgtcacccaggtc
aaggtccgctccgtgctcacctgtgagtccgccgtcggcacctgtgccatgtgctacggc
cgttcgctggcctccggcaagacggtggacgtcggcgaggccgtcggcatcgtcgcggcc
cagtccatcggcgagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtg
gccggcgacgacatcacgcagggtctgccccgtgtcaccgagctgttcgaggcacgccag
cccaagggcaaggccccgatcgccgaggccgacggcgtcgtgcgcatcgaggacggcgac
cgttcgcgcaagctcgtcatcgtgcgtgacgacggcggcgacgacctggagtacccggtc
ggtcgtcgtacccgtctcgagtacgacgagcccagcgggcgtcgtgtcgtcatccgtgac
ggcgctcacgtctcgatcggccagcagctcaccgccggtcaggtcgacccgcaggacgtg
ctccgcatccgcggcctccgcaaggtgcaggagcacctcgtggaggaggtccagaaggtc
tacggcacccagggcgccccgatccacgacaagcacatcgagatcatcgtgcggcagatg
ctgcgccggatcactgtcatcgactccggcgacaccagcatgatgccgggcgagctcgtc
gaccgcgccacctacgaggcggccaaccgccaggcgctcgccgagggtggccgccccggc
gagggtcgtccggtcctgatgggcatcacgaaggcgtcgctcgcgacggactcgtggctg
tcggcggcctccttccaggagaccaccaaggtgctcaccgacgcggcgatccagggcaag
agcgactcgctcgtcggcctcaaggagaacgtcatcctcggcaagctgatcccggcgggt
accggtctcgaccgttaccgcaacattcgggtggagcccacggaggaggcgcgcgcctcg
gcctacacgatgaactacgacccgtacgactactcgttcggttcggattcgctcggccca
gccgtcccgctggaggacatggacttcggcgagatccgctga
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