Tessaracoccus lacteus: QH948_03940
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Entry
QH948_03940 CDS
T10309
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tls Tessaracoccus lacteus
Pathway
tls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QH948_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tls03021
]
QH948_03940
03400 DNA repair and recombination proteins [BR:
tls03400
]
QH948_03940
Enzymes [BR:
tls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QH948_03940
Transcription machinery [BR:
tls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QH948_03940
DNA repair and recombination proteins [BR:
tls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QH948_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WGT47929
LinkDB
All DBs
Position
860155..861165
Genome browser
AA seq
336 aa
AA seq
DB search
MLIAQRPTLSEEVVSEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKIEGNQ
HEFSTLEGIVEDVTEIILNLKGLVLSSEEDEPVVMYLRKAGAGAVTAGDIQPPAGVEIHN
PDLHIATLNDNGKLEMELVVERGRGYVSAAQNKDPESEIGRIPVDSIYSPVLKVTYKVEA
TRVAQRTDFDRLIVDVETKNSILPRDAVASAGRTLVELFGLARELNVEAEGIEIGPSPVD
EQITESLNLPVEDLELSVRSYNCLKREGIHTVGELVARSEEDLLDIRNFGSKSIDEVKET
LAGLGLALRDSHPGFDPMQAIERYDEDSDFAETEQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgctcagcgcccgaccctctccgaagaggtcgtctccgagttccgttcccgg
ttcgtcatcgagccgctggagcccggcttcggctacaccctcggcaactcgctgcgtcgc
accctcctgtcgtccatcccgggcgcctcggtgaccagcatcaagatcgagggcaaccag
cacgagttctccaccctggagggcatcgtcgaggatgtcaccgagatcatcctcaacctc
aagggcctcgtgctgtcgtccgaggaggacgagcccgtcgtcatgtacctgcgcaaggcc
ggtgccggtgcggtcaccgccggggacatccagcccccggccggtgtcgagatccacaac
ccggatctgcacatcgccaccctcaacgacaacggcaagctcgagatggagctcgtcgtc
gagcgtggacgcggctacgtgtccgctgcgcagaacaaggaccccgagtccgagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcc
acccgtgtcgcccagcgcacggacttcgaccgtctgatcgtcgacgtcgagaccaaaaac
tcgatcctgccccgcgacgccgtcgcctcggccggtcgcaccctggtcgagctcttcggc
ctggcgcgtgagctgaacgtcgaggccgagggcatcgagatcggcccgtcgcccgtcgac
gagcagatcacggagtccctgaacctcccggtcgaggacctggagctgtcggtgcgttcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcgtcgcccgcagcgaa
gaggacctgctcgacatccgcaacttcggttcgaagtccatcgacgaggtcaaggagacc
ctcgccggcctcggactcgcgctgcgtgactcgcacccgggcttcgacccgatgcaggcc
atcgagcgctacgacgaggactcggacttcgccgagaccgagcagtactga
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