Thermococcus litoralis: OCC_01074
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Entry
OCC_01074 CDS
T02800
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tlt
Thermococcus litoralis
Pathway
tlt03022
Basal transcription factors
tlt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OCC_01074
09124 Replication and repair
03420 Nucleotide excision repair
OCC_01074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlt03021
]
OCC_01074
03036 Chromosome and associated proteins [BR:
tlt03036
]
OCC_01074
03400 DNA repair and recombination proteins [BR:
tlt03400
]
OCC_01074
Enzymes [BR:
tlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
OCC_01074
Transcription machinery [BR:
tlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OCC_01074
Chromosome and associated proteins [BR:
tlt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OCC_01074
DNA repair and recombination proteins [BR:
tlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OCC_01074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_22
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
EHR79081
UniProt:
H3ZLS9
LinkDB
All DBs
Position
complement(77161..79092)
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AA seq
643 aa
AA seq
DB search
MSEYFPYNSLRPNQEEFIKLVDNAVRNGENLVIEAPTGFGKTVSVLAGALPYAKDMGYKI
IYLARTHKQMDRVIEELKAISKKTHVSGVEFRSRKELCLHQYIQNFAPDAYNAMIVCKNL
KKLGKCEFFENLKKKKEEFDELVQYFIQTPAEPITVLTYSKMFDFCPYELTRKVALNSDV
IVASYLYMINPAIRENFMSYFDFDYSDLIVIFDEAHNLPDQAINALSDKVSIHSINRAIK
EADEYKEHETANFLSIFLKGLENLYQEKLKDMKVEEVPILPESIFYHVFDVLGINERQLI
RILDQMVKAGDAIREDKIERNLPPRSYVGRVGEFLLLWFALIGKEDYLFLMSRDKGFSLE
LVALDPSKALSFIKNVQSAIFMSGTLTPLEAFADIMGVEGRLKKFPRMVKRENALVLVAR
DVSTRGDERSLELYKKLARYVVEAAKFIPKNVGVFTASYEVLEGLLSANVDVRIREETGK
KVFIEKKGASSKENDLLVMAFKEEAKKDGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGIP
YARPTPRVQAQIRYFENKFPGKGRYYGYILPAHRKLVQAAGRVHRSEEEKGAIIVLDYRL
LWKSVQRDLPDWMRETLKPVTLASMKRHLIDFYRGEKIKVEGT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatacttcccttataactccttaaggccaaaccaagaagagttcatcaagcta
gtggataatgcagtaagaaacggcgaaaatcttgtcattgaggctccaacaggctttgga
aaaactgtaagtgtgttggctggagctttgccctatgccaaggatatgggatacaagata
atctacctcgcaagaacgcataagcagatggacagagttatagaagagctcaaagccata
agcaagaaaacccatgtaagcggagttgagttcaggagcagaaaagaactttgccttcac
cagtatattcaaaactttgcccccgacgcttacaacgcgatgatagtctgcaaaaatctc
aaaaagcttggcaaatgcgagttttttgaaaacttaaagaaaaagaaggaagaatttgac
gaacttgtccagtacttcattcaaacgcctgcggaacccataacagtgctcacctattct
aaaatgtttgacttctgtccttacgagcttacccggaaggttgcacttaattctgatgta
atagtggcgagctacctctacatgataaatccagctatcagggagaactttatgagctat
tttgattttgactactctgacttgatagtgatcttcgatgaagcacataatctaccggat
caggcaataaatgccttaagcgacaaggtaagcatccatagcatcaacagggcaataaaa
gaagccgatgaatacaaggaacacgagactgccaattttttaagcatctttctaaaggga
ttggagaatctctatcaggaaaaattgaaggatatgaaggttgaggaagttcccatcctt
cctgaaagcatcttttaccacgtttttgacgttctgggaattaatgagagacagcttatt
agaattctcgatcagatggtaaaggctggagatgcaataagggaggacaaaatcgagaga
aaccttcctcctaggagctatgtcggaagggtaggagaatttttgctcctttggtttgcc
cttattgggaaggaggattatctctttttgatgagcagagataaaggcttctctcttgag
cttgtggcattggatccttcaaaagctctgagttttattaagaatgttcaatcggcaatt
ttcatgtctggaacgctaactcccctagaagcttttgcggatataatgggagtggagggc
aggcttaaaaaattcccccggatggttaagagggaaaatgcccttgttttagttgctagg
gatgtctccacaaggggggacgagagaagccttgaactttacaagaagcttgctagatat
gttgttgaagcagcaaagttcatcccaaaaaacgttggcgtcttcacggcttcttacgaa
gtcctcgaaggacttttatctgccaatgttgatgtacggataagagaagagactggaaaa
aaggtatttatcgagaagaaaggggcctcttcaaaagagaacgaccttttggtgatggca
tttaaggaggaagcaaagaaggatggggctgttttgcttggtgtgatgggaggaaggaat
agtgaagggcaggattacagcggagatgagatgaacggcgttgttttagtgggcattccc
tatgcgagaccaacaccgagggttcaagctcaaataaggtacttcgaaaacaagtttcct
gggaagggaaggtactatggttatattttaccggctcataggaagctcgttcaggctgct
ggaagagtgcacagaagtgaagaagaaaaaggagcgataatagttctagattacagactt
ctctggaagtctgttcaaagagacctcccagattggatgagagaaacactaaagcctgta
actttagcatcaatgaagagacatcttatagacttttataggggagaaaaaattaaagtt
gaagggacttaa
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