Thermococcus litoralis: OCC_03667
Help
Entry
OCC_03667 CDS
T02800
Name
(GenBank) H/ACA RNA-protein complex protein Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tlt
Thermococcus litoralis
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlt03016
]
OCC_03667
Enzymes [BR:
tlt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OCC_03667
Transfer RNA biogenesis [BR:
tlt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OCC_03667
Prokaryotic type
OCC_03667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
SIR2_2
Motif
Other DBs
NCBI-ProteinID:
EHR78255
UniProt:
H3ZP88
LinkDB
All DBs
Position
complement(551172..552179)
Genome browser
AA seq
335 aa
AA seq
DB search
MGRKKKRELMLPADIKREIVIKDEKAETNPKWGFPPDKRPIEMHMQFGVINLDKPPGPTS
HEVVAWVKKLLNLQKAGHGGTLDPKVTGVLPVALERATRVVQALLPAGKEYVALMHLHGD
VPEDKIRAVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEIIEIEGKDVLFRVGVEAGTY
IRSLIHHIGLALGVGAHMAELRRTRSGPFKEDETLVTLHDLIDAYYFWKEDGIEEYFRKA
IQPMEKAVEHLPKVWIRDSAVAAVTHGADLAVPGIVKLHKGIKPGDLVAIMTLKDELVAL
GKAKMNTQEMLTKTKGIAVDVEKVFMPRDWYPKMW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaagaaaaagcgagaactcatgcttcctgctgatattaagagggaaatagtt
attaaggacgaaaaagctgaaaccaacccaaaatggggtttccctccggataaaaggcct
attgaaatgcatatgcagtttggagttataaatctcgacaaacctccgggtcccacaagc
catgaggtagttgcgtgggttaagaagcttttaaaccttcaaaaagccggtcatggaggg
acattagatccaaaggtcactggagttttgcccgtagctctggaaagggccacaagggtt
gttcaggcacttttaccggcaggtaaggagtatgtagcattgatgcaccttcacggggat
gttccagaggacaaaataagggccgttatgaaggaatttgagggagaaatcatccaaaga
ccccctctaagaagtgccgttaagagaagactcaggacaagaaaagtttactacatagag
ataattgagatagagggcaaagatgttttgtttagggttggagttgaggctggtacttat
ataaggtctctcatccatcacattggcttggctttaggagttggcgcccacatggcagag
ctgaggagaacaaggagcggaccgtttaaagaagatgagacccttgtaactctgcacgac
cttatagatgcttattacttctggaaagaggacggtattgaagagtacttcagaaaggca
attcagccgatggagaaagcagttgaacatttacccaaagtgtggataagggactctgca
gttgcagctgtaacccatggtgccgatttagctgtccctggaatagtgaagctccacaaa
ggcataaaacctggagatctcgtggcgataatgaccctcaaagacgagcttgtggctttg
ggcaaggcaaagatgaacacacaggagatgctcacaaagaccaaaggaatagcagtagat
gtggaaaaggtcttcatgccaagggactggtatccaaagatgtggtag
DBGET
integrated database retrieval system
